RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 USP25Q9UHP3 1055 aa16.74■□□□□ 0.27
FGFR1-222ENST00000487647 IQCA1LA6NCM1 817 aa16.73■□□□□ 0.27
FGFR1-222ENST00000487647 FDX1P10109 184 aa16.73■□□□□ 0.27
FGFR1-222ENST00000487647 GCFC2P16383 781 aaKnown RBP16.73■□□□□ 0.27
FGFR1-222ENST00000487647 BACE1P56817 501 aa16.73■□□□□ 0.27
FGFR1-222ENST00000487647 TYRO3Q06418 890 aa16.73■□□□□ 0.27
FGFR1-222ENST00000487647 LETM2Q2VYF4 491 aa16.73■□□□□ 0.27
FGFR1-222ENST00000487647 DTHD1Q6ZMT9 781 aa16.73■□□□□ 0.27
FGFR1-222ENST00000487647 PRPF38AQ8NAV1 312 aaKnown RBP16.73■□□□□ 0.27
FGFR1-222ENST00000487647 ZNF280CQ8ND82 737 aa16.73■□□□□ 0.27
FGFR1-222ENST00000487647 ANP32BQ92688 251 aaKnown RBP16.73■□□□□ 0.27
FGFR1-222ENST00000487647 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.73■□□□□ 0.27
FGFR1-222ENST00000487647 PIK3CDO00329 1044 aa16.72■□□□□ 0.27
FGFR1-222ENST00000487647 CCNT1O60563 726 aaKnown RBP16.72■□□□□ 0.27
FGFR1-222ENST00000487647 GRIN1Q05586 938 aa16.72■□□□□ 0.27
FGFR1-222ENST00000487647 ZYXQ15942 572 aaKnown RBP16.72■□□□□ 0.27
FGFR1-222ENST00000487647 PPP4R3AQ6IN85 833 aa16.72■□□□□ 0.27
FGFR1-222ENST00000487647 KRBA2Q6ZNG9 492 aa16.72■□□□□ 0.27
FGFR1-222ENST00000487647 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.27
FGFR1-222ENST00000487647 KIFC2Q96AC6 838 aa16.72■□□□□ 0.27
FGFR1-222ENST00000487647 TMEM260Q9NX78 707 aa16.72■□□□□ 0.27
FGFR1-222ENST00000487647 VWA3AA6NCI4 1184 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 PPP1R12BO60237 982 aaPredicted RBP16.71■□□□□ 0.27
FGFR1-222ENST00000487647 NEMFO60524 1076 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 OR52Z1P0C646 297 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 EPHX2P34913 555 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 USP11P51784 963 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 MAP3K9P80192 1104 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 PRAMEF18Q5VWM3 479 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 C12orf42Q96LP6 360 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 AK8Q96MA6 479 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 KIAA1468Q9P260 1216 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 MRPL11Q9Y3B7 192 aaKnown RBP16.71■□□□□ 0.27
FGFR1-222ENST00000487647 MRVI1Q9Y6F6 885 aa16.71■□□□□ 0.27
FGFR1-222ENST00000487647 USP2O75604 605 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-222ENST00000487647 TXLNAP40222 546 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 SPP2Q13103 211 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 MTMR2Q13614 643 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 MOXD1Q6UVY6 613 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 KRT26Q7Z3Y9 468 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 CCDC84Q86UT8 332 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-222ENST00000487647 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-222ENST00000487647 CNNM3Q8NE01 707 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-222ENST00000487647 EMILIN3Q9NT22 766 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 ABCB11O95342 1321 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 SSC5DA1L4H1 1573 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 MEIS2O14770 477 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 NF2P35240 595 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
FGFR1-222ENST00000487647 STX1AQ16623 288 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 UBE2SQ16763 222 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 RBM46Q8TBY0 533 aaKnown RBP16.7■□□□□ 0.26
FGFR1-222ENST00000487647 FAM200AQ8TCP9 573 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 SYMPKQ92797 1274 aaKnown RBP16.7■□□□□ 0.26
FGFR1-222ENST00000487647 ANO10Q9NW15 660 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
FGFR1-222ENST00000487647 SPDYE3A6NKU9 549 aa16.69■□□□□ 0.26
FGFR1-222ENST00000487647 POLR2DO15514 142 aaKnown RBP16.69■□□□□ 0.26
FGFR1-222ENST00000487647 ICAM1P05362 532 aa16.69■□□□□ 0.26
FGFR1-222ENST00000487647 VCAM1P19320 739 aa16.69■□□□□ 0.26
FGFR1-222ENST00000487647 IREB2P48200 963 aaKnown RBP16.69■□□□□ 0.26
FGFR1-222ENST00000487647 USH1GQ495M9 461 aa16.69■□□□□ 0.26
FGFR1-222ENST00000487647 LONRF3Q496Y0 759 aa16.69■□□□□ 0.26
FGFR1-222ENST00000487647 SPECC1Q5M775 1068 aa16.69■□□□□ 0.26
FGFR1-222ENST00000487647 TMEM60Q9H2L4 133 aa16.69■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L15C9J2P7 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L13C9JLJ4 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L11C9JVI0 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L18D6R9N7 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L22D6RA61 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L17D6RBQ6 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L19D6RCP7 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L20D6RJB6 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 SLFN14P0C7P3 912 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 SNAP25P60880 206 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L24Q0WX57 530 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 IL17AQ16552 155 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 USP17L6PQ6QN14 398 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 SAMD3Q8N6K7 520 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 EPSTI1Q96J88 318 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 ANO3Q9BYT9 981 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 PPP1R9AQ9ULJ8 1098 aa16.68■□□□□ 0.26
FGFR1-222ENST00000487647 ATAD5Q96QE3 1844 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 CYP3A7-CYP3A51PA0A087WV96 503 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 CYP3A7P24462 503 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 DOCK1Q14185 1865 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 CALCRLQ16602 461 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 MTMR9Q96QG7 549 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 RAB34Q9BZG1 259 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 TANGO6Q9C0B7 1094 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 CCSER1Q9C0I3 900 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
FGFR1-222ENST00000487647 TAF1DQ9H5J8 278 aaPredicted RBP16.67■□□□□ 0.26
FGFR1-222ENST00000487647 MAP3K20Q9NYL2 800 aaKnown RBP16.67■□□□□ 0.26
FGFR1-222ENST00000487647 TMOD4Q9NZQ9 345 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 TUBE1Q9UJT0 475 aa16.67■□□□□ 0.26
FGFR1-222ENST00000487647 AFG3L2Q9Y4W6 797 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms