RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PLS1Q14651 629 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 HDXQ7Z353 690 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 GPR161Q8N6U8 529 aaKnown RBP13.12□□□□□ -0.31
TRA2B-214ENST00000487615 PHF20Q9BVI0 1012 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 TSPYL1Q9H0U9 437 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 NUCKS1Q9H1E3 243 aaKnown RBP13.12□□□□□ -0.31
TRA2B-214ENST00000487615 PHLPP2Q6ZVD8 1323 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 ARHGEF35A5YM69 484 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 FOSP01100 380 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-214ENST00000487615 GPSM2P81274 684 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 TYW1BQ6NUM6 668 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 FMNL3Q8IVF7 1028 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 IFIH1Q9BYX4 1025 aaKnown RBP13.12□□□□□ -0.31
TRA2B-214ENST00000487615 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 TMEM232C9JQI7 657 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 KIAA0754O94854 1291 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 NLRC4Q9NPP4 1024 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 PANK4Q9NVE7 773 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 CUL4BQ13620 913 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 MRPL44Q9H9J2 332 aaKnown RBP13.11□□□□□ -0.31
TRA2B-214ENST00000487615 ZHX1Q9UKY1 873 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-214ENST00000487615 GCNT3O95395 438 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 NEDD1Q8NHV4 660 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 KIFC2Q96AC6 838 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 GOLGA6L10A0A0M3HER8 536 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 B4DLN1 442 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 CCNE1P24864 410 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 ASIC2Q16515 512 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 NOX5Q96PH1 765 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
TRA2B-214ENST00000487615 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
TRA2B-214ENST00000487615 TCRBV5S4A2TA0A5A2 114 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 HSF2BPO75031 334 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 MMP10P09238 476 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 POLD1P28340 1107 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 PRPHP41219 470 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 GPIHBP1Q8IV16 184 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 NIM1KQ8IY84 436 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 SMAP1Q8IYB5 467 aaPredicted RBP13.1□□□□□ -0.31
TRA2B-214ENST00000487615 VGLL2Q8N8G2 317 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 UBE2Q2Q8WVN8 375 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 GDAQ9Y2T3 454 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 SHTN1A0MZ66 631 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 KRT31Q15323 416 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 STAG2Q8N3U4 1231 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 MYCT1Q8N699 235 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 KIAA1024Q9UPX6 916 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 GAS7O60861 476 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 VAV2P52735 878 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 KLHL30Q0D2K2 578 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 WHAMMP3Q1A5X7 153 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 PRR5LQ6MZQ0 368 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 SAR1BQ9Y6B6 198 aa13.1□□□□□ -0.31
TRA2B-214ENST00000487615 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 CC2D2BQ6DHV5 1058 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 RETREG2Q8NC44 543 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 CSRNP1Q96S65 589 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 TTLL12Q14166 644 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-214ENST00000487615 SLC10A5Q5PT55 438 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 MAATS1Q7Z4T9 603 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 TPH2Q8IWU9 490 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 SOWAHDA6NJG2 315 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 TCP11X2Q5H9J9 407 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 MASTLQ96GX5 879 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 RIOK1Q9BRS2 568 aaKnown RBP13.09□□□□□ -0.31
TRA2B-214ENST00000487615 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 THAP9Q9H5L6 903 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 TROAPQ12815 778 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 PTPAQ15257 358 aa13.09□□□□□ -0.31
TRA2B-214ENST00000487615 PLVAPQ9BX97 442 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 ARMCX3Q9UH62 379 aaPredicted RBP13.08□□□□□ -0.32
TRA2B-214ENST00000487615 SALL1Q9NSC2 1324 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 RGPD1P0DJD0 1748 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
TRA2B-214ENST00000487615 GDF11O95390 407 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 TNNC1P63316 161 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 COL9A3Q14050 684 aaPredicted RBP13.08□□□□□ -0.32
TRA2B-214ENST00000487615 NTRK3Q16288 839 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 UBE2SQ16763 222 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 KIAA0753Q2KHM9 967 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 TRIM58Q8NG06 486 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 RPGRIP1Q96KN7 1286 aa13.08□□□□□ -0.32
TRA2B-214ENST00000487615 MRPL11Q9Y3B7 192 aaKnown RBP13.08□□□□□ -0.32
TRA2B-214ENST00000487615 MFAP3LO75121 409 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms