RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 APOBEC3FQ8IUX4 373 aaKnown RBP9.07□□□□□ -0.96
GARNL3-218ENST00000487565 ZSCAN29Q8IWY8 852 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-218ENST00000487565 SCARF2Q96GP6 870 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-218ENST00000487565 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
GARNL3-218ENST00000487565 IDI2Q9BXS1 227 aa9.07□□□□□ -0.96
GARNL3-218ENST00000487565 USP26Q9BXU7 913 aa9.07□□□□□ -0.96
GARNL3-218ENST00000487565 C22orf23Q9BZE7 217 aa9.07□□□□□ -0.96
GARNL3-218ENST00000487565 OSBPL5Q9H0X9 879 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-218ENST00000487565 VRTNQ9H8Y1 702 aa9.07□□□□□ -0.96
GARNL3-218ENST00000487565 NEUROD4Q9HD90 331 aa9.07□□□□□ -0.96
GARNL3-218ENST00000487565 DDX4Q9NQI0 724 aaKnown RBP9.07□□□□□ -0.96
GARNL3-218ENST00000487565 ROBO3Q96MS0 1386 aa9.07□□□□□ -0.96
GARNL3-218ENST00000487565 ASTN2O75129 1339 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 SCN4AP35499 1836 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 FOCADQ5VW36 1801 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 ECM29Q5VYK3 1845 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 MINDY4BA8MYZ0 360 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 EML1O00423 815 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 OIP5O43482 229 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 PPP1R12BO60237 982 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 FGAP02671 866 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 POLR3DP05423 398 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 HLA-DOAP06340 250 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 SLC3A2P08195 630 aaKnown RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 CYP2D6P10635 497 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 MAPTP10636 758 aaKnown RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 HAND2P61296 217 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 TNP2Q05952 138 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 PPARAQ07869 468 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 TCP10Q12799 353 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 SLC4A8Q2Y0W8 1093 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 CRTC2Q53ET0 693 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 EAPPQ56P03 285 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 ANGEL2Q5VTE6 544 aaKnown RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 USP50Q70EL3 339 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 TAF1DQ9H5J8 278 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 GDF2Q9UK05 429 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-218ENST00000487565 ATRNL1Q5VV63 1379 aa9.06□□□□□ -0.96
GARNL3-218ENST00000487565 PITPNM2Q9BZ72 1349 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 UTRNP46939 3433 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 CNTNAP1P78357 1384 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 CYP2D7A0A087X1C5 515 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L12C9JPN9 530 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L21D6R901 530 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 ZNF213O14771 459 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 CYP21A2P08686 494 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 IRS1P35568 1242 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 RBM25P49756 843 aaKnown RBP9.05□□□□□ -0.96
GARNL3-218ENST00000487565 ANAPC15P60006 121 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 PTK7Q13308 1070 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 KRT32Q14532 448 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 SBK1Q52WX2 424 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 CTR9Q6PD62 1173 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 LRRC69Q6ZNQ3 347 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 TTC6Q86TZ1 520 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 FAM83AQ86UY5 434 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 PNMA8AQ86V59 439 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-218ENST00000487565 TBC1D10CQ8IV04 446 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 GOLGA6L1Q8N7Z2 621 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 ZNF526Q8TF50 670 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-218ENST00000487565 FAM151AQ8WW52 585 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 DHX36Q9H2U1 1008 aaKnown RBP9.05□□□□□ -0.96
GARNL3-218ENST00000487565 RNF41Q9H4P4 317 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-218ENST00000487565 PALD1Q9ULE6 856 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 HCN4Q9Y3Q4 1203 aa9.05□□□□□ -0.96
GARNL3-218ENST00000487565 CDK5RAP2Q96SN8 1893 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L15C9J2P7 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L10C9JJH3 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L13C9JLJ4 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L11C9JVI0 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L18D6R9N7 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L22D6RA61 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L17D6RBQ6 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L19D6RCP7 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L20D6RJB6 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 FAM157BP0CG42 384 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 VEGFAP15692 232 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-218ENST00000487565 CD33P20138 364 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 HIRAP54198 1017 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-218ENST00000487565 USP17L24Q0WX57 530 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 DPYDQ12882 1025 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 TRDNQ13061 729 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 RASA3Q14644 834 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 NECTIN1Q15223 517 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 RALYLQ86SE5 291 aaKnown RBP9.04□□□□□ -0.96
GARNL3-218ENST00000487565 CRACR2BQ8N4Y2 399 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-218ENST00000487565 GALNT6Q8NCL4 622 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 DCPSQ96C86 337 aaKnown RBP9.04□□□□□ -0.96
GARNL3-218ENST00000487565 CSRNP1Q96S65 589 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 CNNM2Q9H8M5 875 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 ZNF287Q9HBT7 754 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 TOMM22Q9NS69 142 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 ANAPC4Q9UJX5 808 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 PPP2R3BQ9Y5P8 575 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 SNX14Q9Y5W7 946 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 NEDD4P46934 1319 aa9.04□□□□□ -0.96
GARNL3-218ENST00000487565 FAM196BA6NMK8 535 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 PCP11498 1178 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms