RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 JAG1P78504 1218 aa25.6■■□□□ 1.69
LRRC1-203ENST00000487251 CCDC17Q96LX7 622 aa25.6■■□□□ 1.69
LRRC1-203ENST00000487251 CTNND2Q9UQB3 1225 aa25.6■■□□□ 1.69
LRRC1-203ENST00000487251 UTRNP46939 3433 aa25.6■■□□□ 1.69
LRRC1-203ENST00000487251 PNMA6FA0A0J9YX94 578 aa25.6■■□□□ 1.69
LRRC1-203ENST00000487251 RRAGBQ5VZM2 374 aa25.6■■□□□ 1.69
LRRC1-203ENST00000487251 SIAH1Q8IUQ4 282 aa25.6■■□□□ 1.69
LRRC1-203ENST00000487251 PSME4Q14997 1843 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 COL4A5P29400 1685 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 TECP42680 631 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 CCDC150Q8NCX0 1101 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 TRIM34Q9BYJ4 488 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 MAPK8IP1Q9UQF2 711 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 C10orf71Q711Q0 1435 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 RAD17O75943 681 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 TDP2O95551 362 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 PRPHP41219 470 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 GDAQ9Y2T3 454 aa25.59■■□□□ 1.69
LRRC1-203ENST00000487251 LAD1O00515 517 aa25.58■■□□□ 1.69
LRRC1-203ENST00000487251 RPN1P04843 607 aaKnown RBP25.58■■□□□ 1.69
LRRC1-203ENST00000487251 PYM1Q9BRP8 204 aaKnown RBP25.58■■□□□ 1.69
LRRC1-203ENST00000487251 ARFGEF1Q9Y6D6 1849 aa25.58■■□□□ 1.68
LRRC1-203ENST00000487251 MYO1BO43795 1136 aa25.58■■□□□ 1.68
LRRC1-203ENST00000487251 SLC37A4O43826 429 aa25.58■■□□□ 1.68
LRRC1-203ENST00000487251 RRP1BQ14684 758 aaKnown RBP25.58■■□□□ 1.68
LRRC1-203ENST00000487251 SYCP1Q15431 976 aa25.58■■□□□ 1.68
LRRC1-203ENST00000487251 hCG_1984214I3L0E3 225 aa25.57■■□□□ 1.68
LRRC1-203ENST00000487251 GPATCH4Q5T3I0 446 aaKnown RBP25.57■■□□□ 1.68
LRRC1-203ENST00000487251 TATDN1Q6P1N9 297 aa25.57■■□□□ 1.68
LRRC1-203ENST00000487251 ZNF713Q8N859 430 aaPredicted RBP25.57■■□□□ 1.68
LRRC1-203ENST00000487251 CCSER1Q9C0I3 900 aa25.57■■□□□ 1.68
LRRC1-203ENST00000487251 ZNF277Q9NRM2 450 aaPredicted RBP25.57■■□□□ 1.68
LRRC1-203ENST00000487251 PLCG1P19174 1290 aa25.57■■□□□ 1.68
LRRC1-203ENST00000487251 TNNI2P48788 182 aa25.57■■□□□ 1.68
LRRC1-203ENST00000487251 SPATA1Q5VX52 437 aa25.57■■□□□ 1.68
LRRC1-203ENST00000487251 CABP7Q86V35 215 aa25.57■■□□□ 1.68
LRRC1-203ENST00000487251 NUP88Q99567 741 aaPredicted RBP25.57■■□□□ 1.68
LRRC1-203ENST00000487251 TXKP42681 527 aa25.56■■□□□ 1.68
LRRC1-203ENST00000487251 SNAP25P60880 206 aa25.56■■□□□ 1.68
LRRC1-203ENST00000487251 CLRN2A0PK11 232 aa25.56■■□□□ 1.68
LRRC1-203ENST00000487251 ZBTB5O15062 677 aa25.56■■□□□ 1.68
LRRC1-203ENST00000487251 SLFN13Q68D06 897 aa25.56■■□□□ 1.68
LRRC1-203ENST00000487251 TTLL6Q8N841 843 aa25.56■■□□□ 1.68
LRRC1-203ENST00000487251 SUPT20HQ8NEM7 779 aa25.56■■□□□ 1.68
LRRC1-203ENST00000487251 ZBTB12Q9Y330 459 aaPredicted RBP25.56■■□□□ 1.68
LRRC1-203ENST00000487251 TCP10L2B9ZVM9 353 aa25.55■■□□□ 1.68
LRRC1-203ENST00000487251 SLC1A4P43007 532 aa25.55■■□□□ 1.68
LRRC1-203ENST00000487251 ICA1Q05084 483 aa25.55■■□□□ 1.68
LRRC1-203ENST00000487251 APTXQ7Z2E3 356 aaKnown RBP25.55■■□□□ 1.68
LRRC1-203ENST00000487251 KANSL2Q9H9L4 492 aa25.55■■□□□ 1.68
LRRC1-203ENST00000487251 DDX41Q9UJV9 622 aaKnown RBP25.55■■□□□ 1.68
LRRC1-203ENST00000487251 TEX33O43247 280 aa25.55■■□□□ 1.68
LRRC1-203ENST00000487251 DPEP1P16444 411 aa25.55■■□□□ 1.68
LRRC1-203ENST00000487251 ZNF771Q7L3S4 317 aaPredicted RBP25.55■■□□□ 1.68
LRRC1-203ENST00000487251 CCAR2Q8N163 923 aaKnown RBP25.55■■□□□ 1.68
LRRC1-203ENST00000487251 RIC8AQ9NPQ8 531 aa25.55■■□□□ 1.68
LRRC1-203ENST00000487251 KCNA3P22001 575 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 E4F1Q66K89 784 aaPredicted RBP25.54■■□□□ 1.68
LRRC1-203ENST00000487251 CC2D2BQ6DHV5 1058 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 MTMR8Q96EF0 704 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 MMTAG2Q9BU76 263 aaKnown RBP25.54■■□□□ 1.68
LRRC1-203ENST00000487251 NYAP2Q9P242 653 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 SMCHD1A6NHR9 2005 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 PSMD14O00487 310 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 ABCB5Q2M3G0 1257 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 QRICH1Q2TAL8 776 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 ZNF658Q5TYW1 1059 aaPredicted RBP25.54■■□□□ 1.68
LRRC1-203ENST00000487251 GJA10Q969M2 543 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 MKL1Q969V6 931 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 CSRNP1Q96S65 589 aa25.54■■□□□ 1.68
LRRC1-203ENST00000487251 CCDC112Q8NEF3 446 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 UIMC1Q96RL1 719 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 KBTBD4Q9NVX7 518 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 KLRC4O43908 158 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 GH2P01242 217 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 TAL1P17542 331 aaPredicted RBP25.53■■□□□ 1.68
LRRC1-203ENST00000487251 PRCPP42785 496 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 CALCRLQ16602 461 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 CCDC93Q567U6 631 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 CDKAL1Q5VV42 579 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 LARGE2Q8N3Y3 721 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 MTMR9Q96QG7 549 aa25.53■■□□□ 1.68
LRRC1-203ENST00000487251 CLK2P49760 499 aaKnown RBP25.52■■□□□ 1.68
LRRC1-203ENST00000487251 DHX8Q14562 1220 aaKnown RBP25.52■■□□□ 1.68
LRRC1-203ENST00000487251 NR1I3Q14994 352 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 KMT5BQ4FZB7 885 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 CGNQ9P2M7 1197 aaKnown RBP25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L15C9J2P7 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L13C9JLJ4 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L11C9JVI0 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L18D6R9N7 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L22D6RA61 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L17D6RBQ6 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L19D6RCP7 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L20D6RJB6 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 NPM3O75607 178 aaKnown RBP25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L24Q0WX57 530 aa25.52■■□□□ 1.68
LRRC1-203ENST00000487251 TBX2Q13207 712 aaPredicted RBP25.52■■□□□ 1.68
LRRC1-203ENST00000487251 RSBN1LQ6PCB5 846 aaPredicted RBP25.52■■□□□ 1.68
LRRC1-203ENST00000487251 USP17L6PQ6QN14 398 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms