RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 NKD2Q969F2 451 aaPredicted RBP14.88□□□□□ -0.03
ATPAF1-205ENST00000487193 RMDN1Q96DB5 314 aa14.88□□□□□ -0.03
ATPAF1-205ENST00000487193 AKAP2Q9Y2D5 859 aa14.88□□□□□ -0.03
ATPAF1-205ENST00000487193 COPB2P35606 906 aa14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 NBL1P41271 181 aa14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 MKRN4PQ13434 485 aaPredicted RBP14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 COL9A2Q14055 689 aaPredicted RBP14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 FRMD5Q7Z6J6 570 aa14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 RPAINQ86UA6 219 aa14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 CCDC144CPQ8IYA2 1237 aa14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 ZNF214Q9UL59 606 aaPredicted RBP14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 GNEQ9Y223 722 aaKnown RBP14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 RIPK3Q9Y572 518 aa14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 RIF1Q5UIP0 2472 aaKnown RBP14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 FAM186AA6NE01 2351 aa14.87□□□□□ -0.03
ATPAF1-205ENST00000487193 RBAK-RBAKDNI3L0D1 243 aa14.86□□□□□ -0.03
ATPAF1-205ENST00000487193 GJB5O95377 273 aa14.86□□□□□ -0.03
ATPAF1-205ENST00000487193 DLX2Q07687 328 aaPredicted RBP14.86□□□□□ -0.03
ATPAF1-205ENST00000487193 SIGLEC14Q08ET2 396 aa14.86□□□□□ -0.03
ATPAF1-205ENST00000487193 NBPF20Q3BBV1 942 aa14.86□□□□□ -0.03
ATPAF1-205ENST00000487193 FAM47CQ5HY64 1035 aa14.86□□□□□ -0.03
ATPAF1-205ENST00000487193 CLEC10AQ8IUN9 316 aa14.86□□□□□ -0.03
ATPAF1-205ENST00000487193 KATNBL1Q9H079 304 aa14.86□□□□□ -0.03
ATPAF1-205ENST00000487193 WDR46O15213 610 aaKnown RBP14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 RAD21O60216 631 aa14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 ARID4AP29374 1257 aaPredicted RBP14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 SNRNP48Q6IEG0 339 aaKnown RBP14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 SIAH1Q8IUQ4 282 aa14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 MIGA1Q8NAN2 632 aa14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 REPS2Q8NFH8 660 aa14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 FGD4Q96M96 766 aa14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 NSUN3Q9H649 340 aaKnown RBP14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 VCPKMTQ9H867 229 aa14.85□□□□□ -0.03
ATPAF1-205ENST00000487193 MYO5AQ9Y4I1 1855 aaKnown RBP14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 CACNA1HO95180 2353 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 DNAH14Q0VDD8 3507 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 POLR3DP05423 398 aaPredicted RBP14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 SMPD1P17405 629 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 GPM6BQ13491 265 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 COL19A1Q14993 1142 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 TMEM63BQ5T3F8 832 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 ANKRD35Q8N283 1001 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 COL26A1Q96A83 441 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 ASIC4Q96FT7 647 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 ARHGEF10LQ9HCE6 1279 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 PPP1R9AQ9ULJ8 1098 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 TMX2Q9Y320 296 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 SALL2Q9Y467 1007 aaPredicted RBP14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 EPG5Q9HCE0 2579 aa14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 TRIP12Q14669 1992 aaPredicted RBP14.84□□□□□ -0.03
ATPAF1-205ENST00000487193 TANC1Q9C0D5 1861 aa14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 PITPNM1O00562 1244 aa14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 PDGFBP01127 241 aaPredicted RBP14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 CYP7A1P22680 504 aa14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 EVX2Q03828 476 aa14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 EPC2Q52LR7 807 aa14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 MAGEB6Q8N7X4 407 aa14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 PDGFCQ9NRA1 345 aa14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 RALYQ9UKM9 306 aaKnown RBP14.83□□□□□ -0.04
ATPAF1-205ENST00000487193 VPS13AQ96RL7 3174 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 MYL3P08590 195 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 SMAD4Q13485 552 aaKnown RBP14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 BFSP2Q13515 415 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 TCTN1Q2MV58 587 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 TMEM179Q6ZVK1 233 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 CPXCR1Q8N123 301 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 TEX13BQ9BXU2 312 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 IGFLR1Q9H665 355 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 COPRSQ9NQ92 184 aa14.82□□□□□ -0.04
ATPAF1-205ENST00000487193 H3BNC9 293 aa14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 UQCRFS1P1P0C7P4 283 aa14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 NUBP1P53384 320 aa14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 CNTN2Q02246 1040 aa14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 FAM83BQ5T0W9 1011 aa14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 SH2D4AQ9H788 454 aa14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 CD207Q9UJ71 328 aa14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 INSL6Q9Y581 213 aa14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 DDX49Q9Y6V7 483 aaKnown RBP14.81□□□□□ -0.04
ATPAF1-205ENST00000487193 NCK2O43639 380 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 CYP2E1P05181 493 aaPredicted RBP14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 UBTFL1P0CB47 393 aaPredicted RBP14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 ICA1Q05084 483 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 GPNMBQ14956 572 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 ST3GAL2Q16842 350 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 CTC1Q2NKJ3 1217 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 CNKSR3Q6P9H4 555 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 EEPD1Q7L9B9 569 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 KIAA2013Q8IYS2 634 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 NOD1Q9Y239 953 aa14.8□□□□□ -0.04
ATPAF1-205ENST00000487193 DMXL1Q9Y485 3027 aa14.79□□□□□ -0.04
ATPAF1-205ENST00000487193 LOC730098B7Z3J9 87 aa14.79□□□□□ -0.04
ATPAF1-205ENST00000487193 LINC01565O15544 149 aa14.79□□□□□ -0.04
ATPAF1-205ENST00000487193 GTF2F1P35269 517 aaKnown RBP eCLIP14.79□□□□□ -0.04
ATPAF1-205ENST00000487193 CHMP4BP1P59074 171 aa14.79□□□□□ -0.04
ATPAF1-205ENST00000487193 GABPAQ06546 454 aa14.79□□□□□ -0.04
ATPAF1-205ENST00000487193 HYAL1Q12794 435 aa14.79□□□□□ -0.04
ATPAF1-205ENST00000487193 GPHNQ9NQX3 736 aaPredicted RBP14.79□□□□□ -0.04
ATPAF1-205ENST00000487193 POLR3EQ9NVU0 708 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms