RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 COG6Q9Y2V7 657 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 Q9Y3F1 56 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 TRIP12Q14669 1992 aaPredicted RBP9.17□□□□□ -0.94
PDPN-205ENST00000487038 SCN10AQ9Y5Y9 1956 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 RALGAPA2Q2PPJ7 1873 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 ASTN1O14525 1302 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 TNKSO95271 1327 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.16□□□□□ -0.94
PDPN-205ENST00000487038 ZNF316A6NFI3 1004 aaPredicted RBP9.16□□□□□ -0.94
PDPN-205ENST00000487038 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 USP17L21D6R901 530 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 F5H6K3 240 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 PITPNM1O00562 1244 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 DYNC1LI2O43237 492 aaPredicted RBP9.16□□□□□ -0.94
PDPN-205ENST00000487038 BAIAP3O94812 1187 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 MBD4O95243 580 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
PDPN-205ENST00000487038 CPT1AP50416 773 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 TAP1Q03518 808 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 KLRC3Q07444 240 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 GRB10Q13322 594 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 HSP90AB4PQ58FF6 505 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 ZKSCAN2Q63HK3 967 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 HERC6Q8IVU3 1022 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 FTSJ3Q8IY81 847 aaKnown RBP9.16□□□□□ -0.94
PDPN-205ENST00000487038 TMEM57Q8N5G2 664 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 SNX27Q96L92 541 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 FGD4Q96M96 766 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 UIMC1Q96RL1 719 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 NUP88Q99567 741 aaPredicted RBP9.16□□□□□ -0.94
PDPN-205ENST00000487038 FTOQ9C0B1 505 aaKnown RBP eCLIP9.16□□□□□ -0.94
PDPN-205ENST00000487038 ALDH8A1Q9H2A2 487 aaPredicted RBP9.16□□□□□ -0.94
PDPN-205ENST00000487038 C1orf115Q9H7X2 142 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 HOMER2Q9NSB8 354 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 NYAP2Q9P242 653 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 CACNA1HO95180 2353 aa9.16□□□□□ -0.94
PDPN-205ENST00000487038 GRIN2DO15399 1336 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 ZBED9Q6R2W3 1325 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 RAD50Q92878 1312 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 EPOPA6NHQ4 379 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 NDUFB10O96000 172 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 ADD2P35612 726 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 PSMC6P62333 389 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 TKFCQ3LXA3 575 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 BRDTQ58F21 947 aaPredicted RBP9.15□□□□□ -0.94
PDPN-205ENST00000487038 KRT40Q6A162 431 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 IQSEC1Q6DN90 963 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 GJD3Q8N144 294 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 CLASRPQ8N2M8 674 aaKnown RBP9.15□□□□□ -0.94
PDPN-205ENST00000487038 CCDC155Q8N6L0 562 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 FAM133AQ8N9E0 248 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 KHSRPQ92945 711 aaKnown RBP eCLIP9.15□□□□□ -0.94
PDPN-205ENST00000487038 UBE2ZQ9H832 354 aaPredicted RBP9.15□□□□□ -0.94
PDPN-205ENST00000487038 MKNK2Q9HBH9 465 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 ZNF287Q9HBT7 754 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
PDPN-205ENST00000487038 ISY1Q9ULR0 285 aaKnown RBP9.15□□□□□ -0.94
PDPN-205ENST00000487038 SYNPO2Q9UMS6 1093 aa9.15□□□□□ -0.94
PDPN-205ENST00000487038 USP34Q70CQ2 3546 aa9.15□□□□□ -0.95
PDPN-205ENST00000487038 CYP2D7A0A087X1C5 515 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 PRKAB2O43741 272 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 IFIT2P09913 472 aaKnown RBP9.14□□□□□ -0.95
PDPN-205ENST00000487038 CYP2C9P11712 490 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 SMPD1P17405 629 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 STAT2P52630 851 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 NHLH1Q02575 133 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 BFSP2Q13515 415 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 LRRFIP1Q32MZ4 808 aaKnown RBP9.14□□□□□ -0.95
PDPN-205ENST00000487038 PUS10Q3MIT2 529 aaKnown RBP9.14□□□□□ -0.95
PDPN-205ENST00000487038 FAM47CQ5HY64 1035 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 ZSCAN25Q6NSZ9 544 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 FBXO16Q8IX29 292 aaPredicted RBP9.14□□□□□ -0.95
PDPN-205ENST00000487038 RPAP2Q8IXW5 612 aaPredicted RBP9.14□□□□□ -0.95
PDPN-205ENST00000487038 ZBED2Q9BTP6 218 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 VTA1Q9NP79 307 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 A1CFQ9NQ94 594 aaKnown RBP9.14□□□□□ -0.95
PDPN-205ENST00000487038 RNF146Q9NTX7 359 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 TRMT13Q9NUP7 481 aaKnown RBP9.14□□□□□ -0.95
PDPN-205ENST00000487038 PAG1Q9NWQ8 432 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 TNNQ9UQP3 1299 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 EXOC6BQ9Y2D4 811 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 SLC4A4Q9Y6R1 1079 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 MICAL3Q7RTP6 2002 aa9.14□□□□□ -0.95
PDPN-205ENST00000487038 BMP3P12645 472 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 CNTN2Q02246 1040 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 IKQ13123 557 aaPredicted RBP9.13□□□□□ -0.95
PDPN-205ENST00000487038 UBE3CQ15386 1083 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 LEXMQ3ZCV2 418 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 CTR9Q6PD62 1173 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 KIAA1211Q6ZU35 1233 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 ITPRIPQ8IWB1 547 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 FAM178BQ8IXR5 827 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 GMCL1P1Q8NEA9 526 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 GDPD5Q8WTR4 605 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 MPHOSPH6Q99547 160 aaKnown RBP9.13□□□□□ -0.95
PDPN-205ENST00000487038 MTG1Q9BT17 334 aaPredicted RBP9.13□□□□□ -0.95
PDPN-205ENST00000487038 IL1RAPL2Q9NP60 686 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 CLIP2Q9UDT6 1046 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms