RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 QRICH1Q2TAL8 776 aa15.33■□□□□ 0.04
SF1-216ENST00000486867 RGS22Q8NE09 1264 aa15.33■□□□□ 0.04
SF1-216ENST00000486867 LRRC2Q9BYS8 371 aa15.33■□□□□ 0.04
SF1-216ENST00000486867 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
SF1-216ENST00000486867 ZSWIM6Q9HCJ5 1215 aa15.33■□□□□ 0.04
SF1-216ENST00000486867 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
SF1-216ENST00000486867 CCDC69A6NI79 296 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 PGK2P07205 417 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 CYBAP13498 195 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 KIF5BP33176 963 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 GNAQP50148 359 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 SOX10P56693 466 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 C8orf34Q49A92 452 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 MFSD14CQ5VZR4 134 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 SHISA4Q96DD7 197 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 TMEM106CQ9BVX2 250 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.045e-7■■■■□ 24.8
SF1-216ENST00000486867 RNF208Q9H0X6 261 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 HMX1Q9NP08 348 aaPredicted RBP15.32■□□□□ 0.04
SF1-216ENST00000486867 CYP39A1Q9NYL5 469 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 ALPK3Q96L96 1907 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 ABCB11O95342 1321 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 SYNGAP1Q96PV0 1343 aa15.32■□□□□ 0.04
SF1-216ENST00000486867 LOC102724159A0A0B4J2E5 919 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 NFIBO00712 420 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 ZBTB5O15062 677 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
SF1-216ENST00000486867 PWP2Q15269 919 aaKnown RBP15.31■□□□□ 0.04
SF1-216ENST00000486867 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 ANKRD35Q8N283 1001 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 FANCBQ8NB91 859 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 CTCFLQ8NI51 663 aaPredicted RBP15.31■□□□□ 0.04
SF1-216ENST00000486867 DDX11Q96FC9 970 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 TCEANC2Q96MN5 208 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 TINF2Q9BSI4 451 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 MYL10Q9BUA6 226 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 BRPF3Q9ULD4 1205 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 SLC12A7Q9Y666 1083 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 ASTN1O14525 1302 aa15.31■□□□□ 0.04
SF1-216ENST00000486867 MKI67P46013 3256 aaKnown RBP15.31■□□□□ 0.04
SF1-216ENST00000486867 CAPN15O75808 1086 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 SGPL1O95470 568 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 CPA1P15085 419 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 TAL1P17542 331 aaPredicted RBP15.3■□□□□ 0.04
SF1-216ENST00000486867 CASTP20810 708 aaKnown RBP15.3■□□□□ 0.04
SF1-216ENST00000486867 CYP2C19P33261 490 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 PPP2R5BQ15173 497 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 NFXL1Q6ZNB6 911 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 RUFY3Q7L099 469 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 FBXO11Q86XK2 927 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 TRPV1Q8NER1 839 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 MORC4Q8TE76 937 aa15.3■□□□□ 0.04
SF1-216ENST00000486867 PNMA6FA0A0J9YX94 578 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 SOWAHBA6NEL2 793 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 POTEB2H3BUK9 544 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 OPLAHO14841 1288 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 SEC24BO95487 1268 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 CNTN2Q02246 1040 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 FUT2Q10981 343 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 TRAF1Q13077 416 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 LHX8Q68G74 356 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 Q6ZUG5 572 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 TMTC3Q6ZXV5 915 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 SRBD1Q8N5C6 995 aaKnown RBP15.29■□□□□ 0.04
SF1-216ENST00000486867 SAMD3Q8N6K7 520 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 U2AF1L4Q8WU68 220 aaKnown RBP15.29■□□□□ 0.04
SF1-216ENST00000486867 NUP133Q8WUM0 1156 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 FAM217BQ9NTX9 383 aaPredicted RBP15.29■□□□□ 0.04
SF1-216ENST00000486867 OGDHLQ9ULD0 1010 aa15.29■□□□□ 0.04
SF1-216ENST00000486867 ZBTB43O43298 467 aa15.28■□□□□ 0.04
SF1-216ENST00000486867 PLEKHA8P1O95397 391 aa15.28■□□□□ 0.04
SF1-216ENST00000486867 SNAI1O95863 264 aaPredicted RBP15.28■□□□□ 0.04
SF1-216ENST00000486867 EN2P19622 333 aaPredicted RBP15.28■□□□□ 0.04
SF1-216ENST00000486867 CCND3P30281 292 aaPredicted RBP15.28■□□□□ 0.04
SF1-216ENST00000486867 SLC4A3P48751 1232 aa15.28■□□□□ 0.04
SF1-216ENST00000486867 BAATQ14032 418 aaPredicted RBP15.28■□□□□ 0.04
SF1-216ENST00000486867 PIGSQ96S52 555 aa15.28■□□□□ 0.04
SF1-216ENST00000486867 KATNBL1Q9H079 304 aa15.28■□□□□ 0.04
SF1-216ENST00000486867 ALDH8A1Q9H2A2 487 aaPredicted RBP15.28■□□□□ 0.04
SF1-216ENST00000486867 VAT1LQ9HCJ6 419 aa15.28■□□□□ 0.04
SF1-216ENST00000486867 RBM28Q9NW13 759 aaKnown RBP15.28■□□□□ 0.04
SF1-216ENST00000486867 MAP3K20Q9NYL2 800 aaKnown RBP15.28■□□□□ 0.04
SF1-216ENST00000486867 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
SF1-216ENST00000486867 CYP46A1Q9Y6A2 500 aa15.28■□□□□ 0.04
SF1-216ENST00000486867 KLF18A0A0U1RQI7 1052 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 SEPT4O43236 478 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 MSCO60682 206 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 ZNF865P0CJ78 1059 aaPredicted RBP15.27■□□□□ 0.04
SF1-216ENST00000486867 RXRAP19793 462 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 HSD17B4P51659 736 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 RPS6P62753 249 aaKnown RBP15.27■□□□□ 0.04
SF1-216ENST00000486867 TOB2Q14106 344 aaPredicted RBP15.27■□□□□ 0.04
SF1-216ENST00000486867 USH1GQ495M9 461 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 MICU3Q86XE3 530 aa15.27■□□□□ 0.04
SF1-216ENST00000486867 ANKLE1Q8NAG6 615 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms