RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ZNF865P0CJ78 1059 aaPredicted RBP15.05■□□□□ -0
CHMP3-208ENST00000486404 ATN1P54259 1190 aaPredicted RBP15.05■□□□□ -0
CHMP3-208ENST00000486404 LRRC41Q15345 812 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 USH1GQ495M9 461 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 CYB5R4Q7L1T6 521 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 CCDC144CPQ8IYA2 1237 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 FAM133AQ8N9E0 248 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 FGD4Q96M96 766 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 ABHD16BQ9H3Z7 469 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 CYP39A1Q9NYL5 469 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 ZMYND8Q9ULU4 1186 aaPredicted RBP15.05■□□□□ -0
CHMP3-208ENST00000486404 COLQQ9Y215 455 aaPredicted RBP15.05■□□□□ -0
CHMP3-208ENST00000486404 SYNRGQ9UMZ2 1314 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 NFIBO00712 420 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 SNAI1O95863 264 aaPredicted RBP15.04■□□□□ -0
CHMP3-208ENST00000486404 PGK1P00558 417 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 ACVR2BQ13705 512 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 WTAPQ15007 396 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 LRRC26Q2I0M4 334 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 HABP4Q5JVS0 413 aaKnown RBP15.04■□□□□ -0
CHMP3-208ENST00000486404 MAP4K1Q92918 833 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 MPHOSPH6Q99547 160 aaKnown RBP15.04■□□□□ -0
CHMP3-208ENST00000486404 UBA5Q9GZZ9 404 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 CPVLQ9H3G5 476 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 SPC25Q9HBM1 224 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 ADD3Q9UEY8 706 aaKnown RBP15.04■□□□□ -0
CHMP3-208ENST00000486404 TRIOBPQ9H2D6 2365 aa15.04■□□□□ -0
CHMP3-208ENST00000486404 LTBP2Q14767 1821 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 CDC45O75419 566 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 SYN1P17600 705 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 CALML3P27482 149 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 SEC23AQ15436 765 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 SLC30A10Q6XR72 485 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 RNF207Q6ZRF8 634 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 NOL8Q76FK4 1167 aaKnown RBP15.03■□□□□ -0
CHMP3-208ENST00000486404 PRKAG2Q9UGJ0 569 aa15.03■□□□□ -0
CHMP3-208ENST00000486404 ABCB11O95342 1321 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 SOWAHBA6NEL2 793 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 C6orf222P0C671 652 aaPredicted RBP15.02■□□□□ -0
CHMP3-208ENST00000486404 ADCYAP1R1P41586 468 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 RTP1P59025 263 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 BAATQ14032 418 aaPredicted RBP15.02■□□□□ -0
CHMP3-208ENST00000486404 CCDC144BQ3MJ40 725 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 STOX1Q6ZVD7 989 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 CHST3Q7LGC8 479 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 CATIPQ7Z7H3 387 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 ADGRF4Q8IZF3 695 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 FERMT2Q96AC1 680 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 LSG1Q9H089 658 aaKnown RBP15.02■□□□□ -0
CHMP3-208ENST00000486404 ATP11BQ9Y2G3 1177 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 TAF6LQ9Y6J9 622 aa15.02■□□□□ -0
CHMP3-208ENST00000486404 DUSP11O75319 330 aaKnown RBP15.01□□□□□ -0.01
CHMP3-208ENST00000486404 ALDH5A1P51649 535 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-208ENST00000486404 QRICH1Q2TAL8 776 aa15.01□□□□□ -0.01
CHMP3-208ENST00000486404 RNF20Q5VTR2 975 aa15.01□□□□□ -0.01
CHMP3-208ENST00000486404 FBXO11Q86XK2 927 aa15.01□□□□□ -0.01
CHMP3-208ENST00000486404 FBXO16Q8IX29 292 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-208ENST00000486404 VAT1LQ9HCJ6 419 aa15.01□□□□□ -0.01
CHMP3-208ENST00000486404 PHF24Q9UPV7 400 aa15.01□□□□□ -0.01
CHMP3-208ENST00000486404 KIAA1217Q5T5P2 1943 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 BAZ2BQ9UIF8 2168 aaKnown RBP15□□□□□ -0.01
CHMP3-208ENST00000486404 A0A1W2PQ45 241 aaPredicted RBP15□□□□□ -0.01
CHMP3-208ENST00000486404 A0A1W2PQY0 241 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 B4DLN1 442 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 KLRF2D3W0D1 207 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 SLC27A2O14975 620 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 ADAMTS4O75173 837 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 MRPL12P52815 198 aaKnown RBP15□□□□□ -0.01
CHMP3-208ENST00000486404 GRM4Q14833 912 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 CREB3L3Q68CJ9 461 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 NFXL1Q6ZNB6 911 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 EEPD1Q7L9B9 569 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 MB21D2Q8IYB1 491 aaPredicted RBP15□□□□□ -0.01
CHMP3-208ENST00000486404 CLEC4DQ8WXI8 215 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 VTA1Q9NP79 307 aa15□□□□□ -0.01
CHMP3-208ENST00000486404 PRDM5Q9NQX1 630 aaPredicted RBP15□□□□□ -0.01
CHMP3-208ENST00000486404 ASTN1O14525 1302 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 LOC102724159A0A0B4J2E5 919 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 PRC1O43663 620 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 MCM5P33992 734 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 ANTXR2P58335 489 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 RPS6P62753 249 aaKnown RBP14.99□□□□□ -0.01
CHMP3-208ENST00000486404 TNFAIP2Q03169 654 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 PDE4DQ08499 809 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 PWP2Q15269 919 aaKnown RBP14.99□□□□□ -0.01
CHMP3-208ENST00000486404 TRIM60Q495X7 471 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 HOMER1Q86YM7 354 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 MCF2L2Q86YR7 1114 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 STAG2Q8N3U4 1231 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 PCSK9Q8NBP7 692 aaKnown RBP14.99□□□□□ -0.01
CHMP3-208ENST00000486404 NUP133Q8WUM0 1156 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 PURBQ96QR8 312 aaKnown RBP14.99□□□□□ -0.01
CHMP3-208ENST00000486404 TSEN34Q9BSV6 310 aaKnown RBP14.99□□□□□ -0.01
CHMP3-208ENST00000486404 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 KATNBL1Q9H079 304 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 JMJD4Q9H9V9 463 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 RBM27Q9P2N5 1060 aaKnown RBP14.99□□□□□ -0.01
CHMP3-208ENST00000486404 MAD2L2Q9UI95 211 aa14.99□□□□□ -0.01
CHMP3-208ENST00000486404 MRPL11Q9Y3B7 192 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms