RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 ZNF865P0CJ78 1059 aaPredicted RBP14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 STAT2P52630 851 aa14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 IKQ13123 557 aaPredicted RBP14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 C9orf50Q5SZB4 431 aa14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 CREB3L3Q68CJ9 461 aa14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 CHMP4CQ96CF2 233 aa14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 SEZ6LQ9BYH1 1024 aa14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 KAT14Q9H8E8 782 aa14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 ZNF214Q9UL59 606 aaPredicted RBP14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 ELP1O95163 1332 aa14.04□□□□□ -0.16
HLA-DOA-204ENST00000485901 ERICH2A1L162 156 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 DCDC2CA8MYV0 355 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 SLC27A2O14975 620 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 RAG1P15918 1043 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 CST5P28325 142 aaPredicted RBP14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 SART3Q15020 963 aaKnown RBP14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 CCDC96Q2M329 555 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 PRAMEF19Q5SWL8 479 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 KCTD1Q719H9 257 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 CYB5R4Q7L1T6 521 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 ENAHQ8N8S7 591 aaPredicted RBP14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 REPS2Q8NFH8 660 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 TEX13BQ9BXU2 312 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 FAM184BQ9ULE4 1060 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 TNKSO95271 1327 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
HLA-DOA-204ENST00000485901 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.16
HLA-DOA-204ENST00000485901 MUC3AQ02505 3323 aa14.02□□□□□ -0.16
HLA-DOA-204ENST00000485901 A0A1W2PQ45 241 aaPredicted RBP14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 A0A1W2PQY0 241 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 ADAMTS4O75173 837 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 DUSP11O75319 330 aaKnown RBP14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 REC8O95072 547 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 PDHBP11177 359 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 OAZ1P54368 228 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 FPGSQ05932 587 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 IFIT1BQ5T764 474 aaKnown RBP14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 ANO1Q5XXA6 986 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 STOX1Q6ZVD7 989 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 SH3RF1Q7Z6J0 888 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 PCSK9Q8NBP7 692 aaKnown RBP14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 PNMA1Q8ND90 353 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 KLHDC9Q8NEP7 349 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 FERMT2Q96AC1 680 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 RNPC3Q96LT9 517 aaKnown RBP14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 FAM161BQ96MY7 647 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 TTYH1Q9H313 450 aaPredicted RBP14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 SLC38A10Q9HBR0 1119 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 TMEM39AQ9NV64 488 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 FBXO40Q9UH90 709 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 TAF6LQ9Y6J9 622 aa14.02□□□□□ -0.17
HLA-DOA-204ENST00000485901 LAMA4Q16363 1823 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 DNAJC25-GNG10A0A024R161 153 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 IFIT3O14879 490 aaKnown RBP14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 TIMP1P01033 207 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 SNHG28P0DPA3 235 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 FOSL2P15408 326 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 NKX3-2P78367 333 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 GPATCH4Q5T3I0 446 aaKnown RBP14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 CCSAPQ6IQ19 270 aaPredicted RBP14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 BTNL9Q6UXG8 535 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 CPXCR1Q8N123 301 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 ABHD16BQ9H3Z7 469 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 SPC25Q9HBM1 224 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 GPCPD1Q9NPB8 672 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 STARD7Q9NQZ5 370 aa14.01□□□□□ -0.17
HLA-DOA-204ENST00000485901 FRMPD2Q68DX3 1309 aaPredicted RBP14□□□□□ -0.17
HLA-DOA-204ENST00000485901 PGK1P00558 417 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
HLA-DOA-204ENST00000485901 MCM5P33992 734 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 ACLYP53396 1101 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 ZNF543Q08ER8 600 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 FAAP100Q0VG06 881 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 SEC23AQ15436 765 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 TSGA10IPQ3SY00 556 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 SNRNP48Q6IEG0 339 aaKnown RBP14□□□□□ -0.17
HLA-DOA-204ENST00000485901 TTBK2Q6IQ55 1244 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 MB21D2Q8IYB1 491 aaPredicted RBP14□□□□□ -0.17
HLA-DOA-204ENST00000485901 DDX11Q96FC9 970 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 GLT1D1Q96MS3 346 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 RAVER2Q9HCJ3 691 aaKnown RBP14□□□□□ -0.17
HLA-DOA-204ENST00000485901 PRR12Q9ULL5 1215 aa14□□□□□ -0.17
HLA-DOA-204ENST00000485901 EPB41L2O43491 1005 aaKnown RBP13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 PGK2P07205 417 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 ITGB8P26012 769 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 SLC16A2P36021 539 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 SLC4A3P48751 1232 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 CDK7P50613 346 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 PPIGQ13427 754 aaKnown RBP eCLIP13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 KRT32Q14532 448 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 WTAPQ15007 396 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 TMEM67Q5HYA8 995 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 SYDE2Q5VT97 1194 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 MFSD5Q6N075 450 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 CHST3Q7LGC8 479 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 TMTC2Q8N394 836 aa13.99□□□□□ -0.17
HLA-DOA-204ENST00000485901 CHST13Q8NET6 341 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms