RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ABCB11O95342 1321 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 ADAMTS3O15072 1205 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 TAL1P17542 331 aaPredicted RBP18.25■□□□□ 0.51
APOE-205ENST00000485628 SYT1P21579 422 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 CPXCR1Q8N123 301 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 SAMD3Q8N6K7 520 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 ZFYVE28Q9HCC9 887 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 RNF186Q9NXI6 227 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 VPS54Q9P1Q0 977 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 CCPG1Q9ULG6 757 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 KIF3AQ9Y496 699 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 CEP350Q5VT06 3117 aa18.25■□□□□ 0.51
APOE-205ENST00000485628 SLC25A27O95847 323 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
APOE-205ENST00000485628 CLK2P49760 499 aaKnown RBP18.24■□□□□ 0.51
APOE-205ENST00000485628 MUM1L1Q5H9M0 696 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 LARP1BQ659C4 914 aaKnown RBP18.24■□□□□ 0.51
APOE-205ENST00000485628 KRT40Q6A162 431 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 SNRNP48Q6IEG0 339 aaKnown RBP18.24■□□□□ 0.51
APOE-205ENST00000485628 GALNT17Q6IS24 598 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 HEATR3Q7Z4Q2 680 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 ANKRD13CQ8N6S4 541 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 FAM184AQ8NB25 1140 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 CHST13Q8NET6 341 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 GPRC5AQ8NFJ5 357 aa18.24■□□□□ 0.51
APOE-205ENST00000485628 SMCR8Q8TEV9 937 aaPredicted RBP18.24■□□□□ 0.51
APOE-205ENST00000485628 MRPL11Q9Y3B7 192 aaKnown RBP18.24■□□□□ 0.51
APOE-205ENST00000485628 PIK3CDO00329 1044 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 MEIS2O14770 477 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 MMP1P03956 469 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 PDCP20941 246 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 NOM1Q5C9Z4 860 aaKnown RBP18.23■□□□□ 0.51
APOE-205ENST00000485628 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
APOE-205ENST00000485628 SPRYD3Q8NCJ5 442 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 TNFRSF25Q93038 417 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 C8orf76Q96K31 380 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 RIC8AQ9NPQ8 531 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 SAGE1Q9NXZ1 904 aa18.23■□□□□ 0.51
APOE-205ENST00000485628 MAP3K20Q9NYL2 800 aaKnown RBP18.23■□□□□ 0.51
APOE-205ENST00000485628 HSP90AA1P07900 732 aaKnown RBP18.22■□□□□ 0.51
APOE-205ENST00000485628 COPB2P35606 906 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 HSD17B4P51659 736 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 USH1GQ495M9 461 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 CCDC148Q8NFR7 591 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 CCDC12Q8WUD4 166 aaPredicted RBP18.22■□□□□ 0.51
APOE-205ENST00000485628 TBC1D5Q92609 795 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 TRERF1Q96PN7 1200 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 PAGR1Q9BTK6 254 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 PORCNQ9H237 461 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 KCNJ14Q9UNX9 436 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
APOE-205ENST00000485628 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
APOE-205ENST00000485628 LCTP09848 1927 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 ZNFX1Q9P2E3 1918 aaKnown RBP18.21■□□□□ 0.51
APOE-205ENST00000485628 SMCO2A6NFE2 343 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 NFIBO00712 420 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 ALAS1P13196 640 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 XBP1P17861 261 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 ERCC3P19447 782 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 U2AF2P26368 475 aaKnown RBP eCLIP18.21■□□□□ 0.51
APOE-205ENST00000485628 NAPAP54920 295 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 MROH8Q9H579 483 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 PSTPIP2Q9H939 334 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 RNF146Q9NTX7 359 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 PCDHA4Q9UN74 947 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 ZDHHC9Q9Y397 364 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 DOCK3Q8IZD9 2030 aa18.21■□□□□ 0.51
APOE-205ENST00000485628 STX6O43752 255 aa18.2■□□□□ 0.5
APOE-205ENST00000485628 CALML3P27482 149 aa18.2■□□□□ 0.5
APOE-205ENST00000485628 CCNA1P78396 465 aa18.2■□□□□ 0.5
APOE-205ENST00000485628 PKP1Q13835 747 aa18.2■□□□□ 0.5
APOE-205ENST00000485628 JMYQ8N9B5 988 aa18.2■□□□□ 0.5
APOE-205ENST00000485628 GLT8D2Q9H1C3 349 aa18.2■□□□□ 0.5
APOE-205ENST00000485628 WBP1LQ9NX94 342 aa18.2■□□□□ 0.5
APOE-205ENST00000485628 FBXO40Q9UH90 709 aa18.2■□□□□ 0.5
APOE-205ENST00000485628 CTDP1Q9Y5B0 961 aaPredicted RBP18.2■□□□□ 0.5
APOE-205ENST00000485628 DNAJC25-GNG10A0A024R161 153 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 MGAMO43451 1857 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 EDIL3O43854 480 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 BRD1O95696 1058 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 GNA11P29992 359 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 BLIDQ8IZY5 108 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 ABRAQ8N0Z2 381 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 OXER1Q8TDS5 423 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 FOXP1Q9H334 677 aaPredicted RBP18.19■□□□□ 0.5
APOE-205ENST00000485628 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 EFCC1Q9HA90 598 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 C6orf50Q9HD87 102 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 A1CFQ9NQ94 594 aaKnown RBP18.19■□□□□ 0.5
APOE-205ENST00000485628 CIZ1Q9ULV3 898 aaPredicted RBP18.19■□□□□ 0.5
APOE-205ENST00000485628 PLXNB2O15031 1838 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 ZNF236Q9UL36 1845 aa18.19■□□□□ 0.5
APOE-205ENST00000485628 BTBD18B2RXH4 712 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 TRPA1O75762 1119 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 TBC1D8O95759 1140 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 CTGFP29279 349 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 ADCY7P51828 1080 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 MRPL12P52815 198 aaKnown RBP18.18■□□□□ 0.5
APOE-205ENST00000485628 NLRP5P59047 1200 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms