RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 IVNS1ABPQ9Y6Y0 642 aa23.06■■□□□ 1.28
COL6A2-208ENST00000485591 ABCB11O95342 1321 aa23.06■■□□□ 1.28
COL6A2-208ENST00000485591 USH1GQ495M9 461 aa23.05■■□□□ 1.28
COL6A2-208ENST00000485591 PIBF1Q8WXW3 757 aa23.05■■□□□ 1.28
COL6A2-208ENST00000485591 TRERF1Q96PN7 1200 aa23.05■■□□□ 1.28
COL6A2-208ENST00000485591 RNF26Q9BY78 433 aaPredicted RBP23.05■■□□□ 1.28
COL6A2-208ENST00000485591 RBM27Q9P2N5 1060 aaKnown RBP23.05■■□□□ 1.28
COL6A2-208ENST00000485591 STRNO43815 780 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 PTPREP23469 700 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 HOXD10P28358 340 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 GRB14Q14449 540 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 OTOP1Q7RTM1 612 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 ABRAQ8N0Z2 381 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 NECAB1Q8N987 351 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 SOCS4Q8WXH5 440 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 LCTP09848 1927 aa23.04■■□□□ 1.28
COL6A2-208ENST00000485591 SLC15A5A6NIM6 579 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 PRPF3O43395 683 aaKnown RBP23.03■■□□□ 1.28
COL6A2-208ENST00000485591 CDKL5O76039 1030 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 FCER1AP12319 257 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 KCTD2Q14681 263 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 MUM1L1Q5H9M0 696 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 MORN1Q5T089 497 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 CLEC4DQ8WXI8 215 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 PHKBQ93100 1093 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 MMP19Q99542 508 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 SRRDQ9UH36 339 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 TRIM17Q9Y577 477 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 PCDHA1Q9Y5I3 950 aa23.03■■□□□ 1.28
COL6A2-208ENST00000485591 V9GY48 417 aaPredicted RBP23.03■■□□□ 1.28
COL6A2-208ENST00000485591 hCG_1642624A0A1W2PR95 340 aa23.02■■□□□ 1.28
COL6A2-208ENST00000485591 PRMT2P55345 433 aa23.02■■□□□ 1.28
COL6A2-208ENST00000485591 ST3GAL1Q11201 340 aa23.02■■□□□ 1.28
COL6A2-208ENST00000485591 CTU1Q7Z7A3 348 aaKnown RBP23.02■■□□□ 1.28
COL6A2-208ENST00000485591 TRIM22Q8IYM9 498 aa23.02■■□□□ 1.28
COL6A2-208ENST00000485591 NUDT12Q9BQG2 462 aa23.02■■□□□ 1.28
COL6A2-208ENST00000485591 GJD2Q9UKL4 321 aa23.02■■□□□ 1.28
COL6A2-208ENST00000485591 MRPL11Q9Y3B7 192 aaKnown RBP23.02■■□□□ 1.28
COL6A2-208ENST00000485591 hCG_1984214I3L0E3 225 aa23.01■■□□□ 1.27
COL6A2-208ENST00000485591 NFIBO00712 420 aa23.01■■□□□ 1.27
COL6A2-208ENST00000485591 AKAP17AQ02040 695 aaKnown RBP23.01■■□□□ 1.27
COL6A2-208ENST00000485591 PRKCZQ05513 592 aa23.01■■□□□ 1.27
COL6A2-208ENST00000485591 ZNF713Q8N859 430 aaPredicted RBP23.01■■□□□ 1.27
COL6A2-208ENST00000485591 USP6NLQ92738 828 aa23.01■■□□□ 1.27
COL6A2-208ENST00000485591 SLC26A6Q9BXS9 759 aa23.01■■□□□ 1.27
COL6A2-208ENST00000485591 MAF1Q9H063 256 aa23.01■■□□□ 1.27
COL6A2-208ENST00000485591 A1CFQ9NQ94 594 aaKnown RBP23.01■■□□□ 1.27
COL6A2-208ENST00000485591 STK36Q9NRP7 1315 aa23.01■■□□□ 1.27
COL6A2-208ENST00000485591 CTDNEP1O95476 244 aa23■■□□□ 1.27
COL6A2-208ENST00000485591 ADORA2AP29274 412 aa23■■□□□ 1.27
COL6A2-208ENST00000485591 FLT3LGP49771 235 aa23■■□□□ 1.27
COL6A2-208ENST00000485591 SSRP1Q08945 709 aaKnown RBP23■■□□□ 1.27
COL6A2-208ENST00000485591 MAP2K5Q13163 448 aa23■■□□□ 1.27
COL6A2-208ENST00000485591 PFKFB3Q16875 520 aaPredicted RBP23■■□□□ 1.27
COL6A2-208ENST00000485591 GABRQQ9UN88 632 aa23■■□□□ 1.27
COL6A2-208ENST00000485591 PFASO15067 1338 aa23■■□□□ 1.27
COL6A2-208ENST00000485591 SCG2P13521 617 aa22.99■■□□□ 1.27
COL6A2-208ENST00000485591 PKN1Q16512 942 aa22.99■■□□□ 1.27
COL6A2-208ENST00000485591 WWC2Q6AWC2 1192 aa22.99■■□□□ 1.27
COL6A2-208ENST00000485591 HEATR3Q7Z4Q2 680 aa22.99■■□□□ 1.27
COL6A2-208ENST00000485591 CCDC83Q8IWF9 413 aa22.99■■□□□ 1.27
COL6A2-208ENST00000485591 ANKRD35Q8N283 1001 aa22.99■■□□□ 1.27
COL6A2-208ENST00000485591 RGS22Q8NE09 1264 aa22.99■■□□□ 1.27
COL6A2-208ENST00000485591 TMX3Q96JJ7 454 aa22.99■■□□□ 1.27
COL6A2-208ENST00000485591 DNAJC25-GNG10A0A024R161 153 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 OPLAHO14841 1288 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 PPFIA3O75145 1194 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 DEXIO95424 95 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 HOXC6P09630 235 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 RGS2P41220 211 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 GHRHRQ02643 423 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 IRF5Q13568 498 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 PPP1R18Q6NYC8 613 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 NSMFQ6X4W1 530 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 MCF2L2Q86YR7 1114 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 NSUN7Q8NE18 718 aaKnown RBP22.98■■□□□ 1.27
COL6A2-208ENST00000485591 GPKOWQ92917 476 aaPredicted RBP eCLIP22.98■■□□□ 1.27
COL6A2-208ENST00000485591 APBA2Q99767 749 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 CYP39A1Q9NYL5 469 aa22.98■■□□□ 1.27
COL6A2-208ENST00000485591 XRCC5P13010 732 aaKnown RBP22.97■■□□□ 1.27
COL6A2-208ENST00000485591 PKN2Q16513 984 aaKnown RBP22.97■■□□□ 1.27
COL6A2-208ENST00000485591 DDX11Q96FC9 970 aa22.97■■□□□ 1.27
COL6A2-208ENST00000485591 LLPHQ9BRT6 129 aaKnown RBP22.97■■□□□ 1.27
COL6A2-208ENST00000485591 BARHL2Q9NY43 387 aa22.97■■□□□ 1.27
COL6A2-208ENST00000485591 PTPN22Q9Y2R2 807 aa22.97■■□□□ 1.27
COL6A2-208ENST00000485591 PTPDC1A2A3K4 754 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 STXBP3O00186 592 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 COBLO75128 1261 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 PGK2P07205 417 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 SLC30A10Q6XR72 485 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 RNF207Q6ZRF8 634 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 DPP9Q86TI2 863 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 SAMD3Q8N6K7 520 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 SNX21Q969T3 373 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 SLC5A4Q9NY91 659 aa22.96■■□□□ 1.27
COL6A2-208ENST00000485591 CYP2B6P20813 491 aa22.95■■□□□ 1.26
COL6A2-208ENST00000485591 NAPAP54920 295 aa22.95■■□□□ 1.26
COL6A2-208ENST00000485591 RPS6P62753 249 aaKnown RBP22.95■■□□□ 1.26
COL6A2-208ENST00000485591 BAATQ14032 418 aaPredicted RBP22.95■■□□□ 1.26
COL6A2-208ENST00000485591 ZNF792Q3KQV3 632 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms