RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 SLC30A10Q6XR72 485 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 FBXO11Q86XK2 927 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 ANKRD35Q8N283 1001 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 MTMR8Q96EF0 704 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 MAP3K14Q99558 947 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 NUDT12Q9BQG2 462 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 MROH8Q9H579 483 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 A1CFQ9NQ94 594 aaKnown RBP13.77□□□□□ -0.21
APTX-227ENST00000485479 PCDHA1Q9Y5I3 950 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 V9GY48 417 aaPredicted RBP13.77□□□□□ -0.21
APTX-227ENST00000485479 LCTP09848 1927 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 DNAH12Q6ZR08 3092 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 PTPDC1A2A3K4 754 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 FCER1AP12319 257 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 OAZ1P54368 228 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 EVCP57679 992 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
APTX-227ENST00000485479 KCTD2Q14681 263 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 SHCBP1Q8NEM2 672 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 TRIB2Q92519 343 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 PLXNA1Q9UIW2 1896 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 OPLAHO14841 1288 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 DPP9Q86TI2 863 aa13.76□□□□□ -0.21
APTX-227ENST00000485479 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
APTX-227ENST00000485479 SLKQ9H2G2 1235 aaPredicted RBP13.76□□□□□ -0.21
APTX-227ENST00000485479 RBM28Q9NW13 759 aaKnown RBP13.76□□□□□ -0.21
APTX-227ENST00000485479 SEC63Q9UGP8 760 aaKnown RBP13.76□□□□□ -0.21
APTX-227ENST00000485479 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 FDX1P10109 184 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 CALML3P27482 149 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 HOXA13P31271 388 aaPredicted RBP13.75□□□□□ -0.21
APTX-227ENST00000485479 MAP2K5Q13163 448 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 NTRK3Q16288 839 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 HEATR3Q7Z4Q2 680 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 USP6NLQ92738 828 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 DDX11Q96FC9 970 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 AMNQ9BXJ7 453 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 MCM3APO60318 1980 aa13.75□□□□□ -0.21
APTX-227ENST00000485479 SLC15A5A6NIM6 579 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 ADCY3O60266 1144 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 HOXD10P28358 340 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 GNAQP50148 359 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 BAATQ14032 418 aaPredicted RBP13.74□□□□□ -0.21
APTX-227ENST00000485479 RABEP1Q15276 862 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 SLC9C1Q4G0N8 1177 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 FBXO46Q6PJ61 603 aaPredicted RBP13.74□□□□□ -0.21
APTX-227ENST00000485479 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
APTX-227ENST00000485479 AIFM3Q96NN9 605 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
APTX-227ENST00000485479 ASTN1O14525 1302 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 NID2Q14112 1375 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 CPLX1O14810 134 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 CFBP00751 764 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 CYP2C19P33261 490 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 RGS2P41220 211 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
APTX-227ENST00000485479 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 CCDC83Q8IWF9 413 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 CHST13Q8NET6 341 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 SOCS4Q8WXH5 440 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 FGD4Q96M96 766 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 APBA2Q99767 749 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 CYP39A1Q9NYL5 469 aa13.74□□□□□ -0.21
APTX-227ENST00000485479 RBBP6Q7Z6E9 1792 aaKnown RBP13.74□□□□□ -0.21
APTX-227ENST00000485479 ADAMTS3O15072 1205 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 CTDNEP1O95476 244 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 GRK4P32298 578 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 FOSBP53539 338 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 ARHGEF6Q15052 776 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 MTFR1Q15390 333 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 PRAMEF19Q5SWL8 479 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 TNS4Q8IZW8 715 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 SHISA4Q96DD7 197 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 LZTS2Q9BRK4 669 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
APTX-227ENST00000485479 COL20A1Q9P218 1284 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 ZNF236Q9UL36 1845 aa13.73□□□□□ -0.21
APTX-227ENST00000485479 STRNO43815 780 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 JAK2O60674 1132 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 PFKFB2O60825 505 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 RCAN1P53805 252 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 PKN1Q16512 942 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 RNF207Q6ZRF8 634 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 GTF3C6Q969F1 213 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 MAML3Q96JK9 1138 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
APTX-227ENST00000485479 GJB4Q9NTQ9 266 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 CCDC196A0A1B0GTZ2 297 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 GNRH1P01148 92 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 INHAP05111 366 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 UBXN2AP68543 259 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 ZNF792Q3KQV3 632 aa13.72□□□□□ -0.21
APTX-227ENST00000485479 USP17L6PQ6QN14 398 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms