RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TRIM29Q14134 588 aa20.24■□□□□ 0.83
CHMP3-207ENST00000485465 C17orf99Q6UX52 265 aa20.24■□□□□ 0.83
CHMP3-207ENST00000485465 FAM177A1Q8N128 213 aaPredicted RBP20.24■□□□□ 0.83
CHMP3-207ENST00000485465 CCDC12Q8WUD4 166 aaPredicted RBP20.24■□□□□ 0.83
CHMP3-207ENST00000485465 MOV10L1Q9BXT6 1211 aaKnown RBP20.24■□□□□ 0.83
CHMP3-207ENST00000485465 GJB4Q9NTQ9 266 aa20.24■□□□□ 0.83
CHMP3-207ENST00000485465 RNF186Q9NXI6 227 aa20.24■□□□□ 0.83
CHMP3-207ENST00000485465 COL11A1P12107 1806 aaPredicted RBP20.24■□□□□ 0.83
CHMP3-207ENST00000485465 MYH6P13533 1939 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 SLC25A27O95847 323 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 BCRP11274 1271 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 PDCP20941 246 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 FAM110CQ1W6H9 321 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 DNAJC5GQ8N7S2 189 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 TRERF1Q96PN7 1200 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 CFHR5Q9BXR6 569 aa20.23■□□□□ 0.83
CHMP3-207ENST00000485465 SMCO2A6NFE2 343 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 COPB2P35606 906 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 NLRP5P59047 1200 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 CCNA1P78396 465 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 KRT40Q6A162 431 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 FBXO18Q8NFZ0 1043 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 CLEC4DQ8WXI8 215 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 PHF20Q9BVI0 1012 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 ZMYND12Q9H0C1 365 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 R3HDMLQ9H3Y0 253 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 HOMER2Q9NSB8 354 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 RNF146Q9NTX7 359 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 KCNJ14Q9UNX9 436 aa20.22■□□□□ 0.83
CHMP3-207ENST00000485465 ESYT2A0FGR8 921 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 OPLAHO14841 1288 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 TRPA1O75762 1119 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 SYT1P21579 422 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 GUCY1B3Q02153 619 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 MUM1L1Q5H9M0 696 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 NCAPG2Q86XI2 1143 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 SHCBP1Q8NEM2 672 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
CHMP3-207ENST00000485465 H3BQV1 296 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 TBC1D8O95759 1140 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 ERCC3P19447 782 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 CALML3P27482 149 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 ADCY7P51828 1080 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 MAP2K1Q02750 393 aaPredicted RBP20.2■□□□□ 0.82
CHMP3-207ENST00000485465 IFFO2Q5TF58 517 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 GALNT17Q6IS24 598 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 MROH8Q9H579 483 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 ACAD9Q9H845 621 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 PSTPIP2Q9H939 334 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 C6orf50Q9HD87 102 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 RIC8AQ9NPQ8 531 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 FBXO40Q9UH90 709 aa20.2■□□□□ 0.82
CHMP3-207ENST00000485465 NFIBO00712 420 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 MMP1P03956 469 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 GNA11P29992 359 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 DDIT3P35638 169 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
CHMP3-207ENST00000485465 NPY5RQ15761 445 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 MCF2L2Q86YR7 1114 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 CUL5Q93034 780 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 GLT8D2Q9H1C3 349 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 PORCNQ9H237 461 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 SAGE1Q9NXZ1 904 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 PCDHA4Q9UN74 947 aa20.19■□□□□ 0.82
CHMP3-207ENST00000485465 STX6O43752 255 aa20.18■□□□□ 0.82
CHMP3-207ENST00000485465 PDIA4P13667 645 aaKnown RBP20.18■□□□□ 0.82
CHMP3-207ENST00000485465 DAGLBQ8NCG7 672 aa20.18■□□□□ 0.82
CHMP3-207ENST00000485465 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
CHMP3-207ENST00000485465 TBC1D5Q92609 795 aa20.18■□□□□ 0.82
CHMP3-207ENST00000485465 EFCC1Q9HA90 598 aa20.18■□□□□ 0.82
CHMP3-207ENST00000485465 VPS37CA5D8V6 355 aaPredicted RBP20.17■□□□□ 0.82
CHMP3-207ENST00000485465 ADAMTS3O15072 1205 aa20.17■□□□□ 0.82
CHMP3-207ENST00000485465 GHRHRQ02643 423 aa20.17■□□□□ 0.82
CHMP3-207ENST00000485465 SAFBQ15424 915 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHMP3-207ENST00000485465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHMP3-207ENST00000485465 TEX2Q8IWB9 1127 aa20.17■□□□□ 0.82
CHMP3-207ENST00000485465 CCAR1Q8IX12 1150 aaKnown RBP20.17■□□□□ 0.82
CHMP3-207ENST00000485465 BLIDQ8IZY5 108 aa20.17■□□□□ 0.82
CHMP3-207ENST00000485465 SAMD3Q8N6K7 520 aa20.17■□□□□ 0.82
CHMP3-207ENST00000485465 MAF1Q9H063 256 aa20.17■□□□□ 0.82
CHMP3-207ENST00000485465 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
CHMP3-207ENST00000485465 MTMR6Q9Y217 621 aa20.17■□□□□ 0.82
CHMP3-207ENST00000485465 SMCHD1A6NHR9 2005 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 GCOM1H8Y6P7 765 aaPredicted RBP20.16■□□□□ 0.82
CHMP3-207ENST00000485465 PIK3CDO00329 1044 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 MEIS2O14770 477 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 CFBP00751 764 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 POLR2MP0CAP2 368 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 MAPK4P31152 587 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 KRT2P35908 639 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 HSD17B4P51659 736 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 UBE2SQ16763 222 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 WDR78Q5VTH9 848 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 USP17L6PQ6QN14 398 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 NSMFQ6X4W1 530 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 DIS3L2Q8IYB7 885 aaKnown RBP20.16■□□□□ 0.82
CHMP3-207ENST00000485465 OXER1Q8TDS5 423 aa20.16■□□□□ 0.82
CHMP3-207ENST00000485465 MAP3K20Q9NYL2 800 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms