RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 TMEM232C9JQI7 657 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 SMARCA5O60264 1052 aaPredicted RBP16.32■□□□□ 0.2
NUP188-206ENST00000485158 PRDM1O75626 825 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 TDO2P48775 406 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
NUP188-206ENST00000485158 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 IQSEC1Q6DN90 963 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 TAPT1Q6NXT6 567 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 TLK2Q86UE8 772 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 LRRC47Q8N1G4 583 aaKnown RBP16.32■□□□□ 0.2
NUP188-206ENST00000485158 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 HOMER2Q9NSB8 354 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 RNF146Q9NTX7 359 aa16.32■□□□□ 0.2
NUP188-206ENST00000485158 SMPD1P17405 629 aa16.31■□□□□ 0.2
NUP188-206ENST00000485158 COL9A1P20849 921 aa16.31■□□□□ 0.2
NUP188-206ENST00000485158 ADAMTS19Q8TE59 1207 aa16.31■□□□□ 0.2
NUP188-206ENST00000485158 AGBL1Q96MI9 1066 aa16.31■□□□□ 0.2
NUP188-206ENST00000485158 WNT8AQ9H1J5 351 aa16.31■□□□□ 0.2
NUP188-206ENST00000485158 SLC28A3Q9HAS3 691 aa16.31■□□□□ 0.2
NUP188-206ENST00000485158 YBX2Q9Y2T7 364 aaKnown RBP16.31■□□□□ 0.2
NUP188-206ENST00000485158 M0R2C6 588 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 ZEB2O60315 1214 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 B4GALT4O60513 344 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 TSPY3P0CV98 308 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 TSPY8P0CW00 308 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 SLC1A4P43007 532 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 NOVP48745 357 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 PDE4BQ07343 736 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 GPATCH3Q96I76 525 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 TRERF1Q96PN7 1200 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 DCTPP1Q9H773 170 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 CYP39A1Q9NYL5 469 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 PCDHA11Q9Y5I1 949 aa16.3■□□□□ 0.2
NUP188-206ENST00000485158 GBF1Q92538 1859 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 LOC102724159A0A0B4J2E5 919 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 PFKMP08237 780 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 POU3F3P20264 500 aaPredicted RBP16.29■□□□□ 0.2
NUP188-206ENST00000485158 TFAP4Q01664 338 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 PWP2Q15269 919 aaKnown RBP16.29■□□□□ 0.2
NUP188-206ENST00000485158 LRRFIP1Q32MZ4 808 aaKnown RBP16.29■□□□□ 0.2
NUP188-206ENST00000485158 RCSD1Q6JBY9 416 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 OTOP2Q7RTS6 562 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
NUP188-206ENST00000485158 PPM1EQ8WY54 764 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 AP5M1Q9H0R1 490 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 TRPV6Q9H1D0 765 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 NKX2-4Q9H2Z4 354 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 VTA1Q9NP79 307 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 PDGFCQ9NRA1 345 aa16.29■□□□□ 0.2
NUP188-206ENST00000485158 DYNC1LI2O43237 492 aaPredicted RBP16.28■□□□□ 0.2
NUP188-206ENST00000485158 APPP05067 770 aa16.28■□□□□ 0.2
NUP188-206ENST00000485158 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
NUP188-206ENST00000485158 PPARAQ07869 468 aa16.28■□□□□ 0.2
NUP188-206ENST00000485158 NOL8Q76FK4 1167 aaKnown RBP16.28■□□□□ 0.2
NUP188-206ENST00000485158 ALDH8A1Q9H2A2 487 aaPredicted RBP16.28■□□□□ 0.2
NUP188-206ENST00000485158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
NUP188-206ENST00000485158 SLC4A7Q9Y6M7 1214 aa16.28■□□□□ 0.2
NUP188-206ENST00000485158 ALAS1P13196 640 aa16.27■□□□□ 0.2
NUP188-206ENST00000485158 MCCP23508 829 aa16.27■□□□□ 0.2
NUP188-206ENST00000485158 CCL23P55773 120 aa16.27■□□□□ 0.2
NUP188-206ENST00000485158 DUSP28Q4G0W2 176 aa16.27■□□□□ 0.2
NUP188-206ENST00000485158 MUM1L1Q5H9M0 696 aa16.27■□□□□ 0.2
NUP188-206ENST00000485158 MIER1Q8N108 512 aa16.27■□□□□ 0.2
NUP188-206ENST00000485158 UHRF1Q96T88 793 aaPredicted RBP16.27■□□□□ 0.2
NUP188-206ENST00000485158 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
NUP188-206ENST00000485158 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.2
NUP188-206ENST00000485158 LCTP09848 1927 aa16.27■□□□□ 0.19
NUP188-206ENST00000485158 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 RBM47A0AV96 593 aaKnown RBP16.26■□□□□ 0.19
NUP188-206ENST00000485158 FOXP2O15409 715 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 ICAM1P05362 532 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 SUPT20HL2P0C7V6 817 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 BMP1P13497 986 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 IGFBP4P22692 258 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 PTGS1P23219 599 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 PSMC6P62333 389 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 CCDC85BQ15834 202 aaPredicted RBP16.26■□□□□ 0.19
NUP188-206ENST00000485158 TMEM63BQ5T3F8 832 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 TSHZ3Q63HK5 1081 aa16.26■□□□□ 0.19
NUP188-206ENST00000485158 FBXO16Q8IX29 292 aaPredicted RBP16.26■□□□□ 0.19
NUP188-206ENST00000485158 SEC62Q99442 399 aaKnown RBP16.26■□□□□ 0.19
NUP188-206ENST00000485158 FGRP09769 529 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 ATP2A2P16615 1042 aaKnown RBP16.25■□□□□ 0.19
NUP188-206ENST00000485158 RABGGTBP53611 331 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 PURAQ00577 322 aaKnown RBP16.25■□□□□ 0.19
NUP188-206ENST00000485158 ZMYM1Q5SVZ6 1142 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 PPP2R2DQ66LE6 453 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 BTNL9Q6UXG8 535 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 KCTD1Q719H9 257 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 EEPD1Q7L9B9 569 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 PI4K2BQ8TCG2 481 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 NAPBQ9H115 298 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 TSPYL2Q9H2G4 693 aaPredicted RBP16.25■□□□□ 0.19
NUP188-206ENST00000485158 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
NUP188-206ENST00000485158 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms