RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 CWC27Q6UX04 472 aaKnown RBP23.71■■□□□ 1.39
ACTB-212ENST00000484841 RASGRP2Q7LDG7 609 aa23.71■■□□□ 1.39
ACTB-212ENST00000484841 ANKRD33Q7Z3H0 272 aa23.71■■□□□ 1.39
ACTB-212ENST00000484841 PLEKHM2Q8IWE5 1019 aa23.71■■□□□ 1.39
ACTB-212ENST00000484841 EXOC6Q8TAG9 804 aa23.71■■□□□ 1.39
ACTB-212ENST00000484841 AP5M1Q9H0R1 490 aa23.71■■□□□ 1.39
ACTB-212ENST00000484841 RANBP17Q9H2T7 1088 aaKnown RBP23.71■■□□□ 1.39
ACTB-212ENST00000484841 OSBPL3Q9H4L5 887 aa23.71■■□□□ 1.39
ACTB-212ENST00000484841 MTMR10Q9NXD2 777 aa23.71■■□□□ 1.39
ACTB-212ENST00000484841 RANBP2P49792 3224 aaKnown RBP23.71■■□□□ 1.39
ACTB-212ENST00000484841 SOWAHBA6NEL2 793 aa23.7■■□□□ 1.38
ACTB-212ENST00000484841 KIAA0355O15063 1070 aa23.7■■□□□ 1.38
ACTB-212ENST00000484841 IGHDP01880 384 aa23.7■■□□□ 1.38
ACTB-212ENST00000484841 ZNF697Q5TEC3 545 aa23.7■■□□□ 1.38
ACTB-212ENST00000484841 TTBK2Q6IQ55 1244 aa23.7■■□□□ 1.38
ACTB-212ENST00000484841 UPF3AQ9H1J1 476 aaKnown RBP23.7■■□□□ 1.38
ACTB-212ENST00000484841 CYP39A1Q9NYL5 469 aa23.7■■□□□ 1.38
ACTB-212ENST00000484841 ADD3Q9UEY8 706 aaKnown RBP23.7■■□□□ 1.38
ACTB-212ENST00000484841 STXBP5LQ9Y2K9 1186 aa23.7■■□□□ 1.38
ACTB-212ENST00000484841 MYADML2A6NDP7 307 aa23.69■■□□□ 1.38
ACTB-212ENST00000484841 TLR3O15455 904 aaKnown RBP23.69■■□□□ 1.38
ACTB-212ENST00000484841 ZEB2O60315 1214 aa23.69■■□□□ 1.38
ACTB-212ENST00000484841 CCSAPQ6IQ19 270 aaPredicted RBP23.69■■□□□ 1.38
ACTB-212ENST00000484841 BTNL9Q6UXG8 535 aa23.69■■□□□ 1.38
ACTB-212ENST00000484841 MPHOSPH6Q99547 160 aaKnown RBP23.69■■□□□ 1.38
ACTB-212ENST00000484841 A0A0U1RQG5 324 aaPredicted RBP23.68■■□□□ 1.38
ACTB-212ENST00000484841 NT5C2P49902 561 aa23.68■■□□□ 1.38
ACTB-212ENST00000484841 FPGSQ05932 587 aa23.68■■□□□ 1.38
ACTB-212ENST00000484841 FAAP100Q0VG06 881 aa23.68■■□□□ 1.38
ACTB-212ENST00000484841 CCDC178Q5BJE1 867 aa23.68■■□□□ 1.38
ACTB-212ENST00000484841 C9orf50Q5SZB4 431 aa23.68■■□□□ 1.38
ACTB-212ENST00000484841 FAM109BQ6ICB4 259 aaPredicted RBP23.68■■□□□ 1.38
ACTB-212ENST00000484841 EEPD1Q7L9B9 569 aa23.68■■□□□ 1.38
ACTB-212ENST00000484841 IQCA1Q86XH1 822 aa23.68■■□□□ 1.38
ACTB-212ENST00000484841 DNAH12Q6ZR08 3092 aa23.67■■□□□ 1.38
ACTB-212ENST00000484841 PTPDC1A2A3K4 754 aa23.67■■□□□ 1.38
ACTB-212ENST00000484841 ADCY6O43306 1168 aa23.67■■□□□ 1.38
ACTB-212ENST00000484841 PDHBP11177 359 aa23.67■■□□□ 1.38
ACTB-212ENST00000484841 IQSEC1Q6DN90 963 aa23.67■■□□□ 1.38
ACTB-212ENST00000484841 TLK2Q86UE8 772 aa23.67■■□□□ 1.38
ACTB-212ENST00000484841 RNPC3Q96LT9 517 aaKnown RBP23.67■■□□□ 1.38
ACTB-212ENST00000484841 KATNBL1Q9H079 304 aa23.67■■□□□ 1.38
ACTB-212ENST00000484841 LAMA4Q16363 1823 aa23.66■■□□□ 1.38
ACTB-212ENST00000484841 BAATQ14032 418 aaPredicted RBP23.66■■□□□ 1.38
ACTB-212ENST00000484841 IMMTQ16891 758 aaKnown RBP23.66■■□□□ 1.38
ACTB-212ENST00000484841 TBC1D10CQ8IV04 446 aa23.66■■□□□ 1.38
ACTB-212ENST00000484841 ZKSCAN3Q9BRR0 538 aa23.66■■□□□ 1.38
ACTB-212ENST00000484841 VTA1Q9NP79 307 aa23.66■■□□□ 1.38
ACTB-212ENST00000484841 CTNNA3Q9UI47 895 aa23.66■■□□□ 1.38
ACTB-212ENST00000484841 SZT2Q5T011 3432 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.65■■□□□ 1.38
ACTB-212ENST00000484841 ARVCFO00192 962 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 DYNC1LI2O43237 492 aaPredicted RBP23.65■■□□□ 1.38
ACTB-212ENST00000484841 CABYRO75952 493 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 TIMP1P01033 207 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 IRX5P78411 483 aaPredicted RBP23.65■■□□□ 1.38
ACTB-212ENST00000484841 BEX3Q00994 111 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 ZNF543Q08ER8 600 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 GPATCH4Q5T3I0 446 aaKnown RBP23.65■■□□□ 1.38
ACTB-212ENST00000484841 KIAA1211Q6ZU35 1233 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 DGKHQ86XP1 1220 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 FBXO16Q8IX29 292 aaPredicted RBP23.65■■□□□ 1.38
ACTB-212ENST00000484841 FAM161BQ96MY7 647 aa23.65■■□□□ 1.38
ACTB-212ENST00000484841 B4DLN1 442 aa23.64■■□□□ 1.37
ACTB-212ENST00000484841 ITGB8P26012 769 aa23.64■■□□□ 1.37
ACTB-212ENST00000484841 CALML3P27482 149 aa23.64■■□□□ 1.37
ACTB-212ENST00000484841 MRPL12P52815 198 aaKnown RBP23.64■■□□□ 1.37
ACTB-212ENST00000484841 FSCN1Q16658 493 aaKnown RBP23.64■■□□□ 1.37
ACTB-212ENST00000484841 RNF207Q6ZRF8 634 aa23.64■■□□□ 1.37
ACTB-212ENST00000484841 KAT14Q9H8E8 782 aa23.64■■□□□ 1.37
ACTB-212ENST00000484841 LRRC37A2A6NM11 1700 aa23.64■■□□□ 1.37
ACTB-212ENST00000484841 NEDD4P46934 1319 aa23.63■■□□□ 1.37
ACTB-212ENST00000484841 LOC102724159A0A0B4J2E5 919 aa23.63■■□□□ 1.37
ACTB-212ENST00000484841 SMPD1P17405 629 aa23.63■■□□□ 1.37
ACTB-212ENST00000484841 ALDH5A1P51649 535 aaPredicted RBP23.63■■□□□ 1.37
ACTB-212ENST00000484841 NKX3-2P78367 333 aa23.63■■□□□ 1.37
ACTB-212ENST00000484841 SMAD3P84022 425 aaKnown RBP23.63■■□□□ 1.37
ACTB-212ENST00000484841 PWP2Q15269 919 aaKnown RBP23.63■■□□□ 1.37
ACTB-212ENST00000484841 GNEQ9Y223 722 aaKnown RBP23.63■■□□□ 1.37
ACTB-212ENST00000484841 Q9Y3F1 56 aa23.63■■□□□ 1.37
ACTB-212ENST00000484841 NFIBO00712 420 aa23.62■■□□□ 1.37
ACTB-212ENST00000484841 KDM4AO75164 1064 aa23.62■■□□□ 1.37
ACTB-212ENST00000484841 CDK7P50613 346 aa23.62■■□□□ 1.37
ACTB-212ENST00000484841 TMEM199Q8N511 208 aa23.62■■□□□ 1.37
ACTB-212ENST00000484841 PURBQ96QR8 312 aaKnown RBP23.62■■□□□ 1.37
ACTB-212ENST00000484841 DSCC1Q9BVC3 393 aa23.62■■□□□ 1.37
ACTB-212ENST00000484841 PDGFCQ9NRA1 345 aa23.62■■□□□ 1.37
ACTB-212ENST00000484841 ASTN1O14525 1302 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 LCTP09848 1927 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 B4E1Z4 1266 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 PPIGQ13427 754 aaKnown RBP eCLIP23.61■■□□□ 1.37
ACTB-212ENST00000484841 MFSD5Q6N075 450 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 TAPT1Q6NXT6 567 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 CXCL17Q6UXB2 119 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 PNMA1Q8ND90 353 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 SEZ6LQ9BYH1 1024 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 KRT23Q9C075 422 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 TBX21Q9UL17 535 aa23.61■■□□□ 1.37
ACTB-212ENST00000484841 WDR19Q8NEZ3 1342 aa23.6■■□□□ 1.37
ACTB-212ENST00000484841 DHX16O60231 1041 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms