RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 USP17L13C9JLJ4 530 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 USP17L11C9JVI0 530 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 USP17L18D6R9N7 530 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 USP17L22D6RA61 530 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 USP17L17D6RBQ6 530 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 USP17L19D6RCP7 530 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 USP17L20D6RJB6 530 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 BAG4O95429 457 aaKnown RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 VCAM1P19320 739 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 SLC16A2P36021 539 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 MRPL12P52815 198 aaKnown RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 FOSBP53539 338 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 GUCY1B3Q02153 619 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 USP17L24Q0WX57 530 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 CDC37Q16543 378 aaPredicted RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 FOXD4L5Q5VV16 416 aaPredicted RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 DIS3L2Q8IYB7 885 aaKnown RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 PROCA1Q8NCQ7 364 aaPredicted RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 FOXD4L4Q8WXT5 416 aaPredicted RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 TANGO6Q9C0B7 1094 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 ARHGAP39Q9C0H5 1083 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
SMAD9-204ENST00000483941 EMILIN3Q9NT22 766 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 HOXC10Q9NYD6 342 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 PRR12Q9ULL5 1215 aa16.03■□□□□ 0.16
SMAD9-204ENST00000483941 MYPNQ86TC9 1320 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 hCG_1642624A0A1W2PR95 340 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 STXBP3O00186 592 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 ZBED4O75132 1171 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 HMGCS2P54868 508 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 LACTBP83111 547 aaPredicted RBP16.02■□□□□ 0.16
SMAD9-204ENST00000483941 RESTQ13127 1097 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 WWC2Q6AWC2 1192 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 CCDC84Q86UT8 332 aaPredicted RBP16.02■□□□□ 0.16
SMAD9-204ENST00000483941 FERMT3Q86UX7 667 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 FBXO11Q86XK2 927 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 NOSTRINQ8IVI9 506 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 DAGLBQ8NCG7 672 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 KIFC2Q96AC6 838 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 SHISA4Q96DD7 197 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 ZMYND12Q9H0C1 365 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 RPAP3Q9H6T3 665 aaPredicted RBP16.02■□□□□ 0.16
SMAD9-204ENST00000483941 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.02■□□□□ 0.16
SMAD9-204ENST00000483941 PCDHA4Q9UN74 947 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 KCNH4Q9UQ05 1017 aa16.02■□□□□ 0.16
SMAD9-204ENST00000483941 ATAD5Q96QE3 1844 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 SMCO2A6NFE2 343 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 TLR2O60603 784 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 DTNBO60941 627 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 FLOT1O75955 427 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 GNRH1P01148 92 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 SNAPC2Q13487 334 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 COG2Q14746 738 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 QRICH1Q2TAL8 776 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 RILPL1Q5EBL4 403 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 RASGRP2Q7LDG7 609 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 DPF3Q92784 378 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 RANBP17Q9H2T7 1088 aaKnown RBP16.01■□□□□ 0.15
SMAD9-204ENST00000483941 CPVLQ9H3G5 476 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 ZCCHC17Q9NP64 241 aaKnown RBP16.01■□□□□ 0.15
SMAD9-204ENST00000483941 NOL7Q9UMY1 257 aaKnown RBP16.01■□□□□ 0.15
SMAD9-204ENST00000483941 KCNJ14Q9UNX9 436 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 PCDHA1Q9Y5I3 950 aa16.01■□□□□ 0.15
SMAD9-204ENST00000483941 CUL9Q8IWT3 2517 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 A0A0G2JLL6 359 aaPredicted RBP16■□□□□ 0.15
SMAD9-204ENST00000483941 DLL1O00548 723 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
SMAD9-204ENST00000483941 MCM4P33991 863 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 ADCY7P51828 1080 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 PRMT2P55345 433 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 SLC35G1Q2M3R5 365 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 KIAA1755Q5JYT7 1200 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 PRRT2Q7Z6L0 340 aaPredicted RBP16■□□□□ 0.15
SMAD9-204ENST00000483941 BLIDQ8IZY5 108 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 SAMD3Q8N6K7 520 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 CUL5Q93034 780 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 MAF1Q9H063 256 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 PPP1R9AQ9ULJ8 1098 aa16■□□□□ 0.15
SMAD9-204ENST00000483941 MRPL11Q9Y3B7 192 aaKnown RBP16■□□□□ 0.15
SMAD9-204ENST00000483941 BTBD18B2RXH4 712 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 IRF6O14896 467 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 CETPP11597 493 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 HOXA7P31268 230 aaPredicted RBP15.99■□□□□ 0.15
SMAD9-204ENST00000483941 TRAPPC10P48553 1259 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 OAZ1P54368 228 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 MTFR1Q15390 333 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 CATSPERGQ6ZRH7 1159 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 KRT25Q7Z3Z0 450 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 SLC17A8Q8NDX2 589 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 GPKOWQ92917 476 aaPredicted RBP eCLIP15.99■□□□□ 0.15
SMAD9-204ENST00000483941 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 MGAMO43451 1857 aa15.99■□□□□ 0.15
SMAD9-204ENST00000483941 ABCB11O95342 1321 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 CCDC194A0A1B0GVG4 234 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 BTBD19C9JJ37 291 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms