RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 EMILIN3Q9NT22 766 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.26■□□□□ 0.03
RXRB-205ENST00000483821 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 SCN4AP35499 1836 aa15.26■□□□□ 0.03
RXRB-205ENST00000483821 GCFC2P16383 781 aaKnown RBP15.25■□□□□ 0.03
RXRB-205ENST00000483821 VCAM1P19320 739 aa15.25■□□□□ 0.03
RXRB-205ENST00000483821 PRPHP41219 470 aa15.25■□□□□ 0.03
RXRB-205ENST00000483821 SYKP43405 635 aa15.25■□□□□ 0.03
RXRB-205ENST00000483821 CLK2P49760 499 aaKnown RBP15.25■□□□□ 0.03
RXRB-205ENST00000483821 USP11P51784 963 aa15.25■□□□□ 0.03
RXRB-205ENST00000483821 TTLL12Q14166 644 aaPredicted RBP15.25■□□□□ 0.03
RXRB-205ENST00000483821 CCDC84Q86UT8 332 aaPredicted RBP15.25■□□□□ 0.03
RXRB-205ENST00000483821 FMR1NBQ8N0W7 255 aaPredicted RBP15.25■□□□□ 0.03
RXRB-205ENST00000483821 TBCKQ8TEA7 893 aa15.25■□□□□ 0.03
RXRB-205ENST00000483821 SDF4Q9BRK5 362 aa15.25■□□□□ 0.03
RXRB-205ENST00000483821 EHMT1Q9H9B1 1298 aa15.25■□□□□ 0.03
RXRB-205ENST00000483821 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
RXRB-205ENST00000483821 A0A1B0GVL5 298 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 SPDYE3A6NKU9 549 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 PIK3CDO00329 1044 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 FLOT1O75955 427 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 ICAM1P05362 532 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 PFKFB1P16118 471 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 LONP1P36776 959 aaKnown RBP15.24■□□□□ 0.03
RXRB-205ENST00000483821 NDUFA8P51970 172 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 SNW1Q13573 536 aaKnown RBP15.24■□□□□ 0.03
RXRB-205ENST00000483821 PRKG1Q13976 671 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 VGLL4Q14135 290 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 LETM2Q2VYF4 491 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 USH1GQ495M9 461 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
RXRB-205ENST00000483821 SH3D19Q5HYK7 790 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 DTHD1Q6ZMT9 781 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.24■□□□□ 0.03
RXRB-205ENST00000483821 ERO1BQ86YB8 467 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 MCF2L2Q86YR7 1114 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 TSPY26PQ9H489 355 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 GOLPH3LQ9H4A5 285 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 RPAP3Q9H6T3 665 aaPredicted RBP15.24■□□□□ 0.03
RXRB-205ENST00000483821 USP25Q9UHP3 1055 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 KCNH3Q9ULD8 1083 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 PPP1R9AQ9ULJ8 1098 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 DOCK1Q14185 1865 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 SSC5DA1L4H1 1573 aa15.24■□□□□ 0.03
RXRB-205ENST00000483821 ATAD5Q96QE3 1844 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L15C9J2P7 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L13C9JLJ4 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L11C9JVI0 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L18D6R9N7 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L22D6RA61 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L17D6RBQ6 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L19D6RCP7 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L20D6RJB6 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
RXRB-205ENST00000483821 CCNT1O60563 726 aaKnown RBP15.23■□□□□ 0.03
RXRB-205ENST00000483821 ZNF202O95125 648 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 POLR2MP0CAP2 368 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 CCDC192P0DO97 292 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 TXLNAP40222 546 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 MRE11P49959 708 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 PPATQ06203 517 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 USP17L24Q0WX57 530 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 PPP4R3AQ6IN85 833 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 KANK3Q6NY19 840 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 CCDC174Q6PII3 467 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 SHC4Q6S5L8 630 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 ELOA2Q8IYF1 753 aaPredicted RBP15.23■□□□□ 0.03
RXRB-205ENST00000483821 CLIC6Q96NY7 704 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 TMEM260Q9NX78 707 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 HOXC10Q9NYD6 342 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 MAP3K20Q9NYL2 800 aaKnown RBP15.23■□□□□ 0.03
RXRB-205ENST00000483821 HPSEQ9Y251 543 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 SNCAIPQ9Y6H5 919 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 WDR90Q96KV7 1748 aa15.23■□□□□ 0.03
RXRB-205ENST00000483821 MYPNQ86TC9 1320 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 FSD2A1L4K1 749 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 POTECB2RU33 542 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 CXCL11O14625 94 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 ADAMTS3O15072 1205 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 NEMFO60524 1076 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 CAVIN2O95810 425 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 OAZ1P54368 228 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 HMGCS2P54868 508 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 SNAP25P60880 206 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 COG2Q14746 738 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
RXRB-205ENST00000483821 CAMK4Q16566 473 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 UBE2SQ16763 222 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 SASS6Q6UVJ0 657 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 MOXD1Q6UVY6 613 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 RBM43Q6ZSC3 357 aaKnown RBP15.22■□□□□ 0.03
RXRB-205ENST00000483821 LDHDQ86WU2 507 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 C4orf32Q8N8J7 132 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 AK8Q96MA6 479 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 RAB34Q9BZG1 259 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 MAF1Q9H063 256 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 CSRNP2Q9H175 543 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 SLC38A10Q9HBR0 1119 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 FBXO28Q9NVF7 368 aa15.22■□□□□ 0.03
RXRB-205ENST00000483821 CCPG1Q9ULG6 757 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms