RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 FAM177A1Q8N128 213 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 SPATA20Q8TB22 786 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 LRRC15Q8TF66 581 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 PAGE5Q96GU1 130 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 NRBP1Q9UHY1 535 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 MAN1B1Q9UKM7 699 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.04□□□□□ -0.81e-16■■■□□ 15.5
CDC42SE1-204ENST00000483763 LTBP3Q9NS15 1303 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 GOLGA6L19H0YKK7 550 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 POTEJP0CG39 1038 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZNF75DP51815 510 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 HTRA3P83110 453 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZRSR1Q15695 479 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 KRT25Q7Z3Z0 450 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 SH3RF1Q7Z6J0 888 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 GMCL1P1Q8NEA9 526 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 MED15Q96RN5 788 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 GLIS2Q9BZE0 524 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 CCDC39Q9UFE4 941 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZKSCAN5Q9Y2L8 839 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 CLK2P49760 499 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 ADCY7P51828 1080 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L24Q0WX57 530 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 KARSQ15046 597 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 FKBP1CQ5VVH2 108 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 USP17L6PQ6QN14 398 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 NEK8Q86SG6 692 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 DCAF4Q8WV16 495 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 P2RX7Q99572 595 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 BPIFA3Q9BQP9 254 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 NAT10Q9H0A0 1025 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZNF541Q9H0D2 1346 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 TMEM232C9JQI7 657 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 SLC37A4O43826 429 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 TDP2O95551 362 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 ATP1A3P13637 1013 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZNF280AP59817 542 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 RASA3Q14644 834 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 CDC37Q16543 378 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 NAALADL2Q58DX5 795 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 DTHD1Q6ZMT9 781 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 FAM83AQ86UY5 434 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 POTEDQ86YR6 584 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 GMCL1Q96IK5 515 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 TEPSINQ96N21 525 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 RIC8AQ9NPQ8 531 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZBTB21Q9ULJ3 1066 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 PCDHA1Q9Y5I3 950 aa10.03□□□□□ -0.8
CDC42SE1-204ENST00000483763 POTECB2RU33 542 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 hCG_1984214I3L0E3 225 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 FZD9O00144 591 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 FMR1Q06787 632 aaKnown RBP eCLIP10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 DPYDQ12882 1025 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 MORC3Q14149 939 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 SARM1Q6SZW1 724 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZNF713Q8N859 430 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 GJA10Q969M2 543 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 PLIN2Q99541 437 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 BLZF1Q9H2G9 400 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 KCNF1Q9H3M0 494 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 PSTPIP2Q9H939 334 aa10.02□□□□□ -0.8
CDC42SE1-204ENST00000483763 KIF3CO14782 793 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 MYO1BO43795 1136 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 NEMFO60524 1076 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 LMOD1P29536 600 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 CLCN1P35523 988 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 LONP1P36776 959 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 TNNI2P48788 182 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 GMPSP49915 693 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 CCDC144BQ3MJ40 725 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 MICALL2Q8IY33 904 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 SMARCE1Q969G3 411 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 TMX2Q9Y320 296 aa10.02□□□□□ -0.81
CDC42SE1-204ENST00000483763 PHF20L1A8MW92 1017 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 MEIS2O14770 477 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 TBC1D12O60347 775 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 BMP3P12645 472 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 PTGS1P23219 599 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 CAP2P40123 477 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 TECP42680 631 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 MAP3K10Q02779 954 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 ZYXQ15942 572 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 TBC1D10BQ4KMP7 808 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 SMYD4Q8IYR2 804 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 IQUBQ8NA54 791 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 MTMR9Q96QG7 549 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 SMCHD1A6NHR9 2005 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 OPLAHO14841 1288 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms