RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NFIBO00712 420 aa20.61■□□□□ 0.89
CPNE1-224ENST00000483359 MCM2P49736 904 aa20.61■□□□□ 0.89
CPNE1-224ENST00000483359 AKAP17AQ02040 695 aaKnown RBP20.61■□□□□ 0.89
CPNE1-224ENST00000483359 PLEKHH3Q7Z736 793 aa20.61■□□□□ 0.89
CPNE1-224ENST00000483359 ACAD9Q9H845 621 aa20.61■□□□□ 0.89
CPNE1-224ENST00000483359 JAK2O60674 1132 aa20.61■□□□□ 0.89
CPNE1-224ENST00000483359 CDKL5O76039 1030 aa20.61■□□□□ 0.89
CPNE1-224ENST00000483359 SSRP1Q08945 709 aaKnown RBP20.61■□□□□ 0.89
CPNE1-224ENST00000483359 TRIM22Q8IYM9 498 aa20.61■□□□□ 0.89
CPNE1-224ENST00000483359 IL27Q8NEV9 243 aa20.61■□□□□ 0.89
CPNE1-224ENST00000483359 RNF26Q9BY78 433 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-224ENST00000483359 CENPFP49454 3210 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 PRPF3O43395 683 aaKnown RBP20.6■□□□□ 0.89
CPNE1-224ENST00000483359 COPB2P35606 906 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 WWC2Q6AWC2 1192 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 NSMFQ6X4W1 530 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 CHST13Q8NET6 341 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 DDX11Q96FC9 970 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 MMP19Q99542 508 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 TRIM17Q9Y577 477 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 ABCB11O95342 1321 aa20.6■□□□□ 0.89
CPNE1-224ENST00000483359 HTTP42858 3142 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 PTPDC1A2A3K4 754 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 PRKCZQ05513 592 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 KCTD2Q14681 263 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 ANKRD35Q8N283 1001 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 NSUN7Q8NE18 718 aaKnown RBP20.59■□□□□ 0.89
CPNE1-224ENST00000483359 DOCK3Q8IZD9 2030 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 FCER1AP12319 257 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 SCG2P13521 617 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 PKN1Q16512 942 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 TKFCQ3LXA3 575 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 CLEC4DQ8WXI8 215 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 FBXO40Q9UH90 709 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 PNMA2Q9UL42 364 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 GABRQQ9UN88 632 aa20.59■□□□□ 0.89
CPNE1-224ENST00000483359 PGK2P07205 417 aa20.58■□□□□ 0.89
CPNE1-224ENST00000483359 PTPREP23469 700 aa20.58■□□□□ 0.89
CPNE1-224ENST00000483359 ADORA2AP29274 412 aa20.58■□□□□ 0.89
CPNE1-224ENST00000483359 PFKFB3Q16875 520 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-224ENST00000483359 OTOP1Q7RTM1 612 aa20.58■□□□□ 0.89
CPNE1-224ENST00000483359 AIFM3Q96NN9 605 aa20.58■□□□□ 0.89
CPNE1-224ENST00000483359 A1CFQ9NQ94 594 aaKnown RBP20.58■□□□□ 0.89
CPNE1-224ENST00000483359 MRPL11Q9Y3B7 192 aaKnown RBP20.58■□□□□ 0.89
CPNE1-224ENST00000483359 RBBP6Q7Z6E9 1792 aaKnown RBP20.58■□□□□ 0.89
CPNE1-224ENST00000483359 NAPAP54920 295 aa20.57■□□□□ 0.88
CPNE1-224ENST00000483359 TYW1BQ6NUM6 668 aa20.57■□□□□ 0.88
CPNE1-224ENST00000483359 GRB14Q14449 540 aa20.57■□□□□ 0.88
CPNE1-224ENST00000483359 SLC30A10Q6XR72 485 aa20.57■□□□□ 0.88
CPNE1-224ENST00000483359 HSCBQ8IWL3 235 aa20.57■□□□□ 0.88
CPNE1-224ENST00000483359 TBC1D5Q92609 795 aa20.57■□□□□ 0.88
CPNE1-224ENST00000483359 RBM27Q9P2N5 1060 aaKnown RBP20.57■□□□□ 0.88
CPNE1-224ENST00000483359 ORC3Q9UBD5 711 aaPredicted RBP20.57■□□□□ 0.88
CPNE1-224ENST00000483359 K7ELQ4 463 aaPredicted RBP20.56■□□□□ 0.88
CPNE1-224ENST00000483359 STXBP3O00186 592 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 OPLAHO14841 1288 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 DEXIO95424 95 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 CFBP00751 764 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 CYP2B6P20813 491 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 FLT3LGP49771 235 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 NUDT12Q9BQG2 462 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 VPS54Q9P1Q0 977 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 STK36Q9NRP7 1315 aa20.56■□□□□ 0.88
CPNE1-224ENST00000483359 CALML3P27482 149 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 FOSBP53539 338 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 ARHGEF6Q15052 776 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 MORN1Q5T089 497 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 RNF207Q6ZRF8 634 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 SOCS4Q8WXH5 440 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 PURBQ96QR8 312 aaKnown RBP20.55■□□□□ 0.88
CPNE1-224ENST00000483359 BARHL2Q9NY43 387 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 SRRDQ9UH36 339 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 SLC15A5A6NIM6 579 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 STRNO43815 780 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 FDPSP14324 419 aaKnown RBP20.55■□□□□ 0.88
CPNE1-224ENST00000483359 HOXA13P31271 388 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-224ENST00000483359 TRAF1Q13077 416 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 BAATQ14032 418 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-224ENST00000483359 DPP9Q86TI2 863 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 SNX21Q969T3 373 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 CYP39A1Q9NYL5 469 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 GJD2Q9UKL4 321 aa20.55■□□□□ 0.88
CPNE1-224ENST00000483359 ZNF236Q9UL36 1845 aa20.54■□□□□ 0.88
CPNE1-224ENST00000483359 HOXD10P28358 340 aa20.54■□□□□ 0.88
CPNE1-224ENST00000483359 RPS6P62753 249 aaKnown RBP20.54■□□□□ 0.88
CPNE1-224ENST00000483359 MAP2K5Q13163 448 aa20.54■□□□□ 0.88
CPNE1-224ENST00000483359 ZNFX1Q9P2E3 1918 aaKnown RBP20.54■□□□□ 0.88
CPNE1-224ENST00000483359 COBLO75128 1261 aa20.54■□□□□ 0.88
CPNE1-224ENST00000483359 ABRAQ8N0Z2 381 aa20.54■□□□□ 0.88
CPNE1-224ENST00000483359 SHISA4Q96DD7 197 aa20.54■□□□□ 0.88
CPNE1-224ENST00000483359 LLPHQ9BRT6 129 aaKnown RBP20.54■□□□□ 0.88
CPNE1-224ENST00000483359 GJB4Q9NTQ9 266 aa20.54■□□□□ 0.88
CPNE1-224ENST00000483359 FOXD4L1Q9NU39 408 aa20.54■□□□□ 0.88
CPNE1-224ENST00000483359 PFASO15067 1338 aa20.53■□□□□ 0.88
CPNE1-224ENST00000483359 hCG_1984214I3L0E3 225 aa20.53■□□□□ 0.88
CPNE1-224ENST00000483359 GNRH1P01148 92 aa20.53■□□□□ 0.88
CPNE1-224ENST00000483359 RGS2P41220 211 aa20.53■□□□□ 0.88
CPNE1-224ENST00000483359 CNTN2Q02246 1040 aa20.53■□□□□ 0.88
CPNE1-224ENST00000483359 CTU1Q7Z7A3 348 aaKnown RBP20.53■□□□□ 0.88
CPNE1-224ENST00000483359 MCF2L2Q86YR7 1114 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms