RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 MRPS5P82675 430 aaKnown RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 ITGA7Q13683 1181 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 FSCN1Q16658 493 aaKnown RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 OTOP2Q7RTS6 562 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 FAM133AQ8N9E0 248 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 KBTBD3Q8NAB2 608 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 SLC43A3Q8NBI5 491 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 GMCL1P1Q8NEA9 526 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 APPBP2Q92624 585 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 AGBL1Q96MI9 1066 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 AP5M1Q9H0R1 490 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 TRPV6Q9H1D0 765 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 MTIF3Q9H2K0 278 aaKnown RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 ACAD9Q9H845 621 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 SLC28A3Q9HAS3 691 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 ZNF287Q9HBT7 754 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 EPB41L4AQ9HCS5 686 aaPredicted RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 THEGQ9P2T0 379 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 RAPGEFL1Q9UHV5 662 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 GNEQ9Y223 722 aaKnown RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 YBX2Q9Y2T7 364 aaKnown RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 DDX49Q9Y6V7 483 aaKnown RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 ASTN1O14525 1302 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 GRIN2DO15399 1336 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 ASB14A6NK59 587 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 PATL2C9JE40 543 aaKnown RBP8.79□□□□□ -1
CSDE1-206ENST00000483030 GPAA1O43292 621 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 CABYRO75952 493 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 TSPY3P0CV98 308 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 TSPY8P0CW00 308 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 FDX1P10109 184 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 SMPD1P17405 629 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 MCCP23508 829 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 RABGGTBP53611 331 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 TFAP4Q01664 338 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 IKQ13123 557 aaPredicted RBP8.79□□□□□ -1
CSDE1-206ENST00000483030 TSHZ3Q63HK5 1081 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 EEPD1Q7L9B9 569 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 TLK2Q86UE8 772 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 NEDD1Q8NHV4 660 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 ADAMTS19Q8TE59 1207 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 CHURC1Q8WUH1 139 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 STAG1Q8WVM7 1258 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 TRERF1Q96PN7 1200 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 CHMP4BQ9H444 224 aaKnown RBP8.79□□□□□ -1
CSDE1-206ENST00000483030 A1CFQ9NQ94 594 aaKnown RBP8.79□□□□□ -1
CSDE1-206ENST00000483030 PDGFCQ9NRA1 345 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 RNF146Q9NTX7 359 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 SYNPO2Q9UMS6 1093 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 ZNF536O15090 1300 aa8.79□□□□□ -1
CSDE1-206ENST00000483030 ZNFX1Q9P2E3 1918 aaKnown RBP8.78□□□□□ -1
CSDE1-206ENST00000483030 M0R2C6 588 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 ZEB2O60315 1214 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 ZFYP08048 801 aaPredicted RBP8.78□□□□□ -1
CSDE1-206ENST00000483030 ALAS1P13196 640 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 MYOGP15173 224 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 GNAT2P19087 354 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 SLC1A4P43007 532 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 STAT2P52630 851 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 SNAP25P60880 206 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 PSMC6P62333 389 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 PDE4BQ07343 736 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 TMEM63BQ5T3F8 832 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 IQSEC1Q6DN90 963 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 TAPT1Q6NXT6 567 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 FAM160B2Q86V87 743 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 RPUSD2Q8IZ73 545 aaKnown RBP8.78□□□□□ -1
CSDE1-206ENST00000483030 IFNL3Q8IZI9 196 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 MIER1Q8N108 512 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 MICALL1Q8N3F8 863 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 IL27Q8NEV9 243 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 UHRF1Q96T88 793 aaPredicted RBP8.78□□□□□ -1
CSDE1-206ENST00000483030 NOC4LQ9BVI4 516 aaKnown RBP8.78□□□□□ -1
CSDE1-206ENST00000483030 SLC4A7Q9Y6M7 1214 aa8.78□□□□□ -1
CSDE1-206ENST00000483030 ZBBXA8MT70 800 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 B4GALT4O60513 344 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 TKFCQ3LXA3 575 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 MUM1L1Q5H9M0 696 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 PPP2R2DQ66LE6 453 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 KIAA1211Q6ZU35 1233 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 KCTD1Q719H9 257 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 FBXO16Q8IX29 292 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-206ENST00000483030 VWCEQ96DN2 955 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 SCLYQ96I15 445 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 GMCL1Q96IK5 515 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 NECAB3Q96P71 396 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-206ENST00000483030 PURBQ96QR8 312 aaKnown RBP8.77□□□□□ -1.01
CSDE1-206ENST00000483030 SEC62Q99442 399 aaKnown RBP8.77□□□□□ -1.01
CSDE1-206ENST00000483030 SEZ6LQ9BYH1 1024 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 NACAP1Q9BZK3 213 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 WNT8AQ9H1J5 351 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 CYP39A1Q9NYL5 469 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 Q9Y3F1 56 aa8.77□□□□□ -1.01
CSDE1-206ENST00000483030 BAZ2AQ9UIF9 1905 aaKnown RBP8.77□□□□□ -1.01
CSDE1-206ENST00000483030 COL11A1P12107 1806 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-206ENST00000483030 RFXAPO00287 272 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 PLA2G6O60733 806 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 SLC3A2P08195 630 aaKnown RBP8.76□□□□□ -1.01
CSDE1-206ENST00000483030 CYP2C9P11712 490 aa8.76□□□□□ -1.01
CSDE1-206ENST00000483030 BMP1P13497 986 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms