RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 HTATIP2Q9BUP3 242 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 CNPY2Q9Y2B0 182 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 MCM3APO60318 1980 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 SH2B2O14492 632 aaPredicted RBP17.61■□□□□ 0.41
COL16A1-213ENST00000482910 DDAH1O94760 285 aa17.61■□□□□ 0.41
COL16A1-213ENST00000482910 RGS22Q8NE09 1264 aa17.61■□□□□ 0.41
COL16A1-213ENST00000482910 CLEC4DQ8WXI8 215 aa17.61■□□□□ 0.41
COL16A1-213ENST00000482910 NEK1Q96PY6 1258 aa17.61■□□□□ 0.41
COL16A1-213ENST00000482910 CPVLQ9H3G5 476 aa17.61■□□□□ 0.41
COL16A1-213ENST00000482910 JMJD4Q9H9V9 463 aa17.61■□□□□ 0.41
COL16A1-213ENST00000482910 SENP2Q9HC62 589 aa17.61■□□□□ 0.41
COL16A1-213ENST00000482910 LCTP09848 1927 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 ASB14A6NK59 587 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 NFIBO00712 420 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 SNAI1O95863 264 aaPredicted RBP17.6■□□□□ 0.41
COL16A1-213ENST00000482910 ZNF865P0CJ78 1059 aaPredicted RBP17.6■□□□□ 0.41
COL16A1-213ENST00000482910 CNTN2Q02246 1040 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 PRAMEF19Q5SWL8 479 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 NSMFQ6X4W1 530 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 ZNF654Q8IZM8 581 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 PAWRQ96IZ0 340 aaKnown RBP17.6■□□□□ 0.41
COL16A1-213ENST00000482910 ABHD16BQ9H3Z7 469 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 RIOX1Q9H6W3 641 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.6■□□□□ 0.41
COL16A1-213ENST00000482910 ABCB11O95342 1321 aa17.6■□□□□ 0.41
COL16A1-213ENST00000482910 SOWAHBA6NEL2 793 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
COL16A1-213ENST00000482910 AKR1A1P14550 325 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 HSPA4P34932 840 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 TRAF1Q13077 416 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 QRICH1Q2TAL8 776 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 PRPF38BQ5VTL8 546 aaKnown RBP17.59■□□□□ 0.41
COL16A1-213ENST00000482910 ARMCX2Q7L311 632 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 SGMS1Q86VZ5 419 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 FBXO11Q86XK2 927 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
COL16A1-213ENST00000482910 ADD3Q9UEY8 706 aaKnown RBP17.59■□□□□ 0.41
COL16A1-213ENST00000482910 DNM1LO00429 736 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 DHX16O60231 1041 aaKnown RBP17.58■□□□□ 0.4
COL16A1-213ENST00000482910 CALM1P0DP23 149 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 CALM2P0DP24 149 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 CALM3P0DP25 149 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 COL6A1P12109 1028 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 TAL1P17542 331 aaPredicted RBP17.58■□□□□ 0.4
COL16A1-213ENST00000482910 SMARCA1P28370 1054 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 KIF5BP33176 963 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 EXOSC10Q01780 885 aaKnown RBP17.58■□□□□ 0.4
COL16A1-213ENST00000482910 ACVR2BQ13705 512 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 BAATQ14032 418 aaPredicted RBP17.58■□□□□ 0.4
COL16A1-213ENST00000482910 COL9A3Q14050 684 aaPredicted RBP17.58■□□□□ 0.4
COL16A1-213ENST00000482910 RNF207Q6ZRF8 634 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 DHX32Q7L7V1 743 aaKnown RBP17.58■□□□□ 0.4
COL16A1-213ENST00000482910 CCDC144CPQ8IYA2 1237 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 ARRDC4Q8NCT1 418 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 MORC4Q8TE76 937 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 DIS3LQ8TF46 1054 aaKnown RBP17.58■□□□□ 0.4
COL16A1-213ENST00000482910 C11orf49Q9H6J7 331 aa17.58■□□□□ 0.4
COL16A1-213ENST00000482910 MRPL11Q9Y3B7 192 aaKnown RBP17.58■□□□□ 0.4
COL16A1-213ENST00000482910 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
COL16A1-213ENST00000482910 ASTN1O14525 1302 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 ZBTB5O15062 677 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 RARBP10826 455 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 GNAQP50148 359 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 USH1GQ495M9 461 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 NFXL1Q6ZNB6 911 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 CTCFLQ8NI51 663 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-213ENST00000482910 LZTS2Q9BRK4 669 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 AMNQ9BXJ7 453 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 KATNBL1Q9H079 304 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 VAT1LQ9HCJ6 419 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 GPHNQ9NQX3 736 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-213ENST00000482910 FAM184BQ9ULE4 1060 aa17.57■□□□□ 0.4
COL16A1-213ENST00000482910 LRRC37A2A6NM11 1700 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 PTPDC1A2A3K4 754 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 CYTH3O43739 400 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 RPS6P62753 249 aaKnown RBP17.56■□□□□ 0.4
COL16A1-213ENST00000482910 SLC35G1Q2M3R5 365 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 ADCK5Q3MIX3 580 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 MCF2L2Q86YR7 1114 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 SAMD3Q8N6K7 520 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 DNERQ8NFT8 737 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 NUP133Q8WUM0 1156 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
COL16A1-213ENST00000482910 ALPK3Q96L96 1907 aa17.55■□□□□ 0.4
COL16A1-213ENST00000482910 ALDH5A1P51649 535 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-213ENST00000482910 GHRHRQ02643 423 aa17.55■□□□□ 0.4
COL16A1-213ENST00000482910 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
COL16A1-213ENST00000482910 MPHOSPH6Q99547 160 aaKnown RBP17.55■□□□□ 0.4
COL16A1-213ENST00000482910 XPNPEP3Q9NQH7 507 aa17.55■□□□□ 0.4
COL16A1-213ENST00000482910 MAP3K20Q9NYL2 800 aaKnown RBP17.55■□□□□ 0.4
COL16A1-213ENST00000482910 ZHX1Q9UKY1 873 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-213ENST00000482910 SNX14Q9Y5W7 946 aa17.55■□□□□ 0.4
COL16A1-213ENST00000482910 SLC12A7Q9Y666 1083 aa17.55■□□□□ 0.4
COL16A1-213ENST00000482910 PNMA6FA0A0J9YX94 578 aa17.54■□□□□ 0.4
COL16A1-213ENST00000482910 B4DLN1 442 aa17.54■□□□□ 0.4
COL16A1-213ENST00000482910 DUSP11O75319 330 aaKnown RBP17.54■□□□□ 0.4
COL16A1-213ENST00000482910 MRPL12P52815 198 aaKnown RBP17.54■□□□□ 0.4
COL16A1-213ENST00000482910 RCAN1P53805 252 aa17.54■□□□□ 0.4
COL16A1-213ENST00000482910 ANO1Q5XXA6 986 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms