RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 LMCD1Q9NZU5 365 aa8.74□□□□□ -1.01
CLK1-212ENST00000482590 PPM1HQ9ULR3 514 aa8.74□□□□□ -1.01
CLK1-212ENST00000482590 MAPK8IP1Q9UQF2 711 aa8.74□□□□□ -1.01
CLK1-212ENST00000482590 TUBGCP6Q96RT7 1819 aa8.74□□□□□ -1.01
CLK1-212ENST00000482590 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
CLK1-212ENST00000482590 PAPPAQ13219 1627 aa8.73□□□□□ -1.01
CLK1-212ENST00000482590 SLITRK5O94991 958 aa8.73□□□□□ -1.01
CLK1-212ENST00000482590 DPH6Q7L8W6 267 aa8.73□□□□□ -1.01
CLK1-212ENST00000482590 NPAS4Q8IUM7 802 aa8.73□□□□□ -1.01
CLK1-212ENST00000482590 KCT2Q8NC54 265 aa8.73□□□□□ -1.01
CLK1-212ENST00000482590 FOXQ1Q9C009 403 aa8.73□□□□□ -1.01
CLK1-212ENST00000482590 CNTNAP4Q9C0A0 1308 aa8.73□□□□□ -1.01
CLK1-212ENST00000482590 BCL9O00512 1426 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 EDC4Q6P2E9 1401 aaKnown RBP8.72□□□□□ -1.01
CLK1-212ENST00000482590 CD163L1Q9NR16 1453 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 PRR33A8MZF0 331 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 LRIG2O94898 1065 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 MAPK1P28482 360 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 AFMP43652 599 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 LRRC14Q15048 493 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 SCARA3Q6AZY7 606 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 TMED8Q6PL24 325 aaPredicted RBP8.72□□□□□ -1.01
CLK1-212ENST00000482590 ZNF662Q6ZS27 426 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 ARHGEF25Q86VW2 580 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 SETDB2Q96T68 719 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 CARD11Q9BXL7 1154 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 CARS2Q9HA77 564 aaKnown RBP8.72□□□□□ -1.01
CLK1-212ENST00000482590 SPON1Q9HCB6 807 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 SEMA3GQ9NS98 782 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 RIPOR2Q9Y4F9 1068 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 NINLQ9Y2I6 1382 aa8.72□□□□□ -1.01
CLK1-212ENST00000482590 LY75O60449 1722 aa8.71□□□□□ -1.01
CLK1-212ENST00000482590 LOC102724159A0A0B4J2E5 919 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 PLSCR1O15162 318 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 RECKO95980 971 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 INPP5AQ14642 412 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 PWP2Q15269 919 aaKnown RBP8.71□□□□□ -1.02
CLK1-212ENST00000482590 HDGFL2Q7Z4V5 671 aaPredicted RBP8.71□□□□□ -1.02
CLK1-212ENST00000482590 NOP9Q86U38 636 aaKnown RBP8.71□□□□□ -1.02
CLK1-212ENST00000482590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.71□□□□□ -1.02
CLK1-212ENST00000482590 ZNF507Q8TCN5 953 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 ELMO3Q96BJ8 720 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 HSPA12BQ96MM6 686 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 FBRSQ9HAH7 460 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 ATP13A1Q9HD20 1204 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 C19orf73Q9NVV2 129 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 USP31Q70CQ4 1352 aa8.71□□□□□ -1.02
CLK1-212ENST00000482590 EXOC5O00471 708 aa8.7□□□□□ -1.02
CLK1-212ENST00000482590 KCNQ2O43526 872 aa8.7□□□□□ -1.02
CLK1-212ENST00000482590 PTPN11Q06124 597 aaPredicted RBP8.7□□□□□ -1.02
CLK1-212ENST00000482590 LRFN4Q6PJG9 635 aa8.7□□□□□ -1.02
CLK1-212ENST00000482590 MARCH10Q8NA82 808 aaPredicted RBP8.7□□□□□ -1.02
CLK1-212ENST00000482590 FBF1Q8TES7 1133 aa8.7□□□□□ -1.02
CLK1-212ENST00000482590 ANKRD24Q8TF21 1146 aa8.7□□□□□ -1.02
CLK1-212ENST00000482590 CYP8B1Q9UNU6 501 aa8.7□□□□□ -1.02
CLK1-212ENST00000482590 A0A1W2PP64 1363 aa8.7□□□□□ -1.02
CLK1-212ENST00000482590 ANKRD33BA6NCL7 494 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 GLI1P08151 1106 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 CELA3AP09093 270 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 RAP1GAPP47736 663 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 SLBPQ14493 270 aaKnown RBP eCLIP8.69□□□□□ -1.02
CLK1-212ENST00000482590 KRTAP19-4Q3LI73 84 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 PCNX4Q63HM2 1172 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 PRR23BQ6ZRT6 265 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 CYFIP1Q7L576 1253 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 NME9Q86XW9 330 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 KIRREL1Q96J84 757 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 PRDM16Q9HAZ2 1276 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 STK32BQ9NY57 414 aa8.69□□□□□ -1.02
CLK1-212ENST00000482590 PRAMEF27A3QJZ7 478 aa8.68□□□□□ -1.02
CLK1-212ENST00000482590 FAM155AB1AL88 458 aaPredicted RBP8.68□□□□□ -1.02
CLK1-212ENST00000482590 TSPAN15O95858 294 aa8.68□□□□□ -1.02
CLK1-212ENST00000482590 ZNF865P0CJ78 1059 aaPredicted RBP8.68□□□□□ -1.02
CLK1-212ENST00000482590 CDKAL1Q5VV42 579 aa8.68□□□□□ -1.02
CLK1-212ENST00000482590 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
CLK1-212ENST00000482590 MICAL1Q8TDZ2 1067 aa8.68□□□□□ -1.02
CLK1-212ENST00000482590 TERF2IPQ9NYB0 399 aa8.68□□□□□ -1.02
CLK1-212ENST00000482590 COL24A1Q17RW2 1714 aa8.68□□□□□ -1.02
CLK1-212ENST00000482590 TAF1LQ8IZX4 1826 aa8.68□□□□□ -1.02
CLK1-212ENST00000482590 C5P01031 1676 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 IL2RBP14784 551 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 ITGB4P16144 1822 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 CFPP27918 469 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 MAPK8P45983 427 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 FMR1Q06787 632 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLK1-212ENST00000482590 NKG7Q16617 165 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 TXNRD1Q16881 649 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 SFRP5Q5T4F7 317 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 MFSD4AQ8N468 514 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 PLPPR2Q96GM1 343 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 MIPEPQ99797 713 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 TPX2Q9ULW0 747 aaKnown RBP8.67□□□□□ -1.02
CLK1-212ENST00000482590 ANKRD26Q9UPS8 1709 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 ST14Q9Y5Y6 855 aa8.67□□□□□ -1.02
CLK1-212ENST00000482590 MAP2P11137 1827 aaKnown RBP8.66□□□□□ -1.02
CLK1-212ENST00000482590 RBAK-RBAKDNI3L0D1 243 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 GIPC1O14908 333 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 YY1P25490 414 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 GDNFP39905 211 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms