RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	FERMT2	Q96AC1	680 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	MMP19	Q99542	508 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	HAUS7	Q99871	368 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	TINF2	Q9BSI4	451 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	SEMA6B	Q9H3T3	888 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	XPNPEP3	Q9NQH7	507 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	ZNF214	Q9UL59	606 aa	Predicted RBP	10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	PPP1R9A	Q9ULJ8	1098 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	DDX19B	Q9UMR2	479 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	TACC3	Q9Y6A5	838 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	ZBED9	Q6R2W3	1325 aa		10.32	□□□□□ -0.76
UBE2F-222	ENST00000482096	CHGB	P05060	677 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	PGK2	P07205	417 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	COPB2	P35606	906 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	KCTD2	Q14681	263 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	QPCT	Q16769	361 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	TJAP1	Q5JTD0	557 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	CTR9	Q6PD62	1173 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	RNF19B	Q6ZMZ0	732 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	RNF180	Q86T96	592 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	SCUBE3	Q8IX30	993 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	REPS2	Q8NFH8	660 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	SYMPK	Q92797	1274 aa	Known RBP	10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	CDX2	Q99626	313 aa	Predicted RBP	10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	BCL11A	Q9H165	835 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	COG6	Q9Y2V7	657 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	SLC4A4	Q9Y6R1	1079 aa		10.31	□□□□□ -0.76
UBE2F-222	ENST00000482096	DNAH12	Q6ZR08	3092 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	ROBO3	Q96MS0	1386 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	TLL1	O43897	1013 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	PGK1	P00558	417 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	CLTB	P09497	229 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	AKR1A1	P14550	325 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	TAL1	P17542	331 aa	Predicted RBP	10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	ITGB8	P26012	769 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	FAM83B	Q5T0W9	1011 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	ZSCAN25	Q6NSZ9	544 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	MSL3	Q8N5Y2	521 aa	Known RBP	10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	ZNF516	Q92618	1163 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	PUS7L	Q9H0K6	701 aa	Known RBP	10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096	LTBP2	Q14767	1821 aa		10.3	□□□□□ -0.76
UBE2F-222	ENST00000482096		A0A1W2PQ45	241 aa	Predicted RBP	10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096		A0A1W2PQY0	241 aa		10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	KIAA0355	O15063	1070 aa		10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	ADAMTS4	O75173	837 aa		10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	SBK1	Q52WX2	424 aa		10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	TOX2	Q96NM4	488 aa		10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	TSEN34	Q9BSV6	310 aa	Known RBP	10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	TTYH1	Q9H313	450 aa	Predicted RBP	10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	CHMP4B	Q9H444	224 aa	Known RBP	10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	IL21	Q9HBE4	155 aa		10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	NYAP2	Q9P242	653 aa		10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.29	□□□□□ -0.76
UBE2F-222	ENST00000482096	DNAJC25-GNG10	A0A024R161	153 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	TMEM265	A0A087WTH1	108 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096		F5H6K3	240 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	ATP2A1	O14983	1001 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	RAD21	O60216	631 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	SNAI1	O95863	264 aa	Predicted RBP	10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	RAG1	P15918	1043 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	RASA1	P20936	1047 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	EPHB4	P54760	987 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	KLRC3	Q07444	240 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	GIMAP6	Q6P9H5	292 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	MAMDC4	Q6UXC1	1216 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	ANKRD33	Q7Z3H0	272 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	PRPF38A	Q8NAV1	312 aa	Known RBP	10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	KLHDC9	Q8NEP7	349 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	MAFA	Q8NHW3	353 aa	Predicted RBP	10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	STRBP	Q96SI9	672 aa	Known RBP	10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	SLF1	Q9BQI6	1058 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	TEX13B	Q9BXU2	312 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	LRRCC1	Q9C099	1032 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	PLSCR2	Q9NRY7	297 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	TMEM39A	Q9NV64	488 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	FAM184B	Q9ULE4	1060 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	CNPY2	Q9Y2B0	182 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	SYNGAP1	Q96PV0	1343 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	SMCHD1	A6NHR9	2005 aa		10.28	□□□□□ -0.76
UBE2F-222	ENST00000482096	GSG1L2	A8MUP6	293 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	PQBP1	O60828	265 aa	Known RBP	10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	NDUFB10	O96000	172 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	ACLY	P53396	1101 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	FAAP100	Q0VG06	881 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	TUSC1	Q2TAM9	212 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	SNRNP48	Q6IEG0	339 aa	Known RBP	10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	NUP133	Q8WUM0	1156 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	MYLIP	Q8WY64	445 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	LENG1	Q96BZ8	264 aa	Predicted RBP	10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	DDX11	Q96FC9	970 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	RNPC3	Q96LT9	517 aa	Known RBP	10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	NUP88	Q99567	741 aa	Predicted RBP	10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	MKNK2	Q9HBH9	465 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	STARD7	Q9NQZ5	370 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	RIPK3	Q9Y572	518 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms