RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 RAD21O60216 631 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 CYP2C19P33261 490 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 CDK8P49336 464 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 ICA1Q05084 483 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 COG2Q14746 738 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 MFSD14CQ5VZR4 134 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 TSHZ3Q63HK5 1081 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 AMOTL1Q8IY63 956 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 NPLOC4Q8TAT6 608 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 MOV10L1Q9BXT6 1211 aaKnown RBP10.81□□□□□ -0.68
HLA-B-253ENST00000481849 PUS7LQ9H0K6 701 aaKnown RBP10.81□□□□□ -0.68
HLA-B-253ENST00000481849 ARHGEF10LQ9HCE6 1279 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 SWAP70Q9UH65 585 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 PFASO15067 1338 aa10.81□□□□□ -0.68
HLA-B-253ENST00000481849 CHD6Q8TD26 2715 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 FOCADQ5VW36 1801 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 FLOT1O75955 427 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 ERCC3P19447 782 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 SKOR1P84550 965 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 GRB14Q14449 540 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 UBE3CQ15386 1083 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 C12orf60Q5U649 245 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 LBX2Q6XYB7 198 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 DPP9Q86TI2 863 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 NCAPG2Q86XI2 1143 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 SIAH1Q8IUQ4 282 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 DDRGK1Q96HY6 314 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 ATP8A2Q9NTI2 1148 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 HOXC10Q9NYD6 342 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 CDK5RAP2Q96SN8 1893 aa10.8□□□□□ -0.68
HLA-B-253ENST00000481849 C5orf42Q9H799 3197 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 EEF2P13639 858 aaKnown RBP10.79□□□□□ -0.68
HLA-B-253ENST00000481849 ADORA2AP29274 412 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 LRRC26Q2I0M4 334 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 ANO1Q5XXA6 986 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 ZSCAN25Q6NSZ9 544 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 CTR9Q6PD62 1173 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 TRPV1Q8NER1 839 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 SPIRE2Q8WWL2 714 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 ATG4CQ96DT6 458 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 SENP6Q9GZR1 1112 aaPredicted RBP10.79□□□□□ -0.68
HLA-B-253ENST00000481849 SPATC1LQ9H0A9 340 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 DDX20Q9UHI6 824 aaKnown RBP10.79□□□□□ -0.68
HLA-B-253ENST00000481849 PCDHGC3Q9UN70 934 aa10.79□□□□□ -0.68
HLA-B-253ENST00000481849 DDX60LQ5H9U9 1706 aaKnown RBP10.78□□□□□ -0.68
HLA-B-253ENST00000481849 COBLO75128 1261 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 COL6A1P12109 1028 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 MAGEA10P43363 369 aaPredicted RBP10.78□□□□□ -0.68
HLA-B-253ENST00000481849 LCE2AQ5TA79 106 aaPredicted RBP10.78□□□□□ -0.68
HLA-B-253ENST00000481849 C16orf86Q6ZW13 317 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 LPAR1Q92633 364 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 HPS1Q92902 700 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 CCDC17Q96LX7 622 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 GDF15Q99988 308 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 C1QTNF1Q9BXJ1 281 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 FBXO28Q9NVF7 368 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 TMX2Q9Y320 296 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 PLXNB2O15031 1838 aa10.78□□□□□ -0.68
HLA-B-253ENST00000481849 USP34Q70CQ2 3546 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 NAV1Q8NEY1 1877 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 MINDY4BA8MYZ0 360 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 WDR46O15213 610 aaKnown RBP10.77□□□□□ -0.69
HLA-B-253ENST00000481849 ZMYND10O75800 440 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 HOXC6P09630 235 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 LRIT3Q3SXY7 679 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 PRAMEF19Q5SWL8 479 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 GJC2Q5T442 439 aaPredicted RBP10.77□□□□□ -0.69
HLA-B-253ENST00000481849 PTCRAQ6ISU1 281 aaPredicted RBP10.77□□□□□ -0.69
HLA-B-253ENST00000481849 GPATCH3Q96I76 525 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 STRBPQ96SI9 672 aaKnown RBP10.77□□□□□ -0.69
HLA-B-253ENST00000481849 UBE2OQ9C0C9 1292 aaKnown RBP10.77□□□□□ -0.69
HLA-B-253ENST00000481849 ATP13A2Q9NQ11 1180 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 MYH1P12882 1939 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 CFAP47Q6ZTR5 3102 aa10.77□□□□□ -0.69
HLA-B-253ENST00000481849 STRNO43815 780 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 APPP05067 770 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 CYBAP13498 195 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 NDUFV2P19404 249 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 KCTD2Q14681 263 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 TMEM132BQ14DG7 1078 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 FAM83BQ5T0W9 1011 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 MB21D1Q8N884 522 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 KBTBD3Q8NAB2 608 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 EHBP1Q8NDI1 1231 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 SHCBP1Q8NEM2 672 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 MAFAQ8NHW3 353 aaPredicted RBP10.76□□□□□ -0.69
HLA-B-253ENST00000481849 OSBP2Q969R2 916 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 NUP88Q99567 741 aaPredicted RBP10.76□□□□□ -0.69
HLA-B-253ENST00000481849 MROH8Q9H579 483 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 KANSL2Q9H9L4 492 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 MKNK2Q9HBH9 465 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 GOPCQ9HD26 462 aa10.76□□□□□ -0.69
HLA-B-253ENST00000481849 ARPP21Q9UBL0 812 aaPredicted RBP10.76□□□□□ -0.69
HLA-B-253ENST00000481849 MOXD2PA6NHM9 499 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 GSG1L2A8MUP6 293 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 M0R2C6 588 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms