RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 SAMD3Q8N6K7 520 aa23.9■■□□□ 1.42
VPS16-207ENST00000481812 RGS22Q8NE09 1264 aa23.9■■□□□ 1.42
VPS16-207ENST00000481812 CCDC12Q8WUD4 166 aaPredicted RBP23.9■■□□□ 1.42
VPS16-207ENST00000481812 RIPK3Q9Y572 518 aa23.9■■□□□ 1.42
VPS16-207ENST00000481812 MGAMO43451 1857 aa23.9■■□□□ 1.42
VPS16-207ENST00000481812 STXBP3O00186 592 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 PEX10O60683 326 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 PPFIA3O75145 1194 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 ALAS1P13196 640 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 XBP1P17861 261 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 MAPK4P31152 587 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 USH1GQ495M9 461 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 HEATR3Q7Z4Q2 680 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 COA7Q96BR5 231 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 DDX11Q96FC9 970 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 TRERF1Q96PN7 1200 aa23.89■■□□□ 1.41
VPS16-207ENST00000481812 ESYT2A0FGR8 921 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 GPR25O00155 361 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 ERCC3P19447 782 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 SP3Q02447 781 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 GHRHRQ02643 423 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 FAM184AQ8NB25 1140 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 CCDC148Q8NFR7 591 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 ALG1Q9BT22 464 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 PORCNQ9H237 461 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 ACAD9Q9H845 621 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 RNF146Q9NTX7 359 aa23.88■■□□□ 1.41
VPS16-207ENST00000481812 MAP3K20Q9NYL2 800 aaKnown RBP23.88■■□□□ 1.41
VPS16-207ENST00000481812 ZNFX1Q9P2E3 1918 aaKnown RBP23.88■■□□□ 1.41
VPS16-207ENST00000481812 RBBP6Q7Z6E9 1792 aaKnown RBP23.88■■□□□ 1.41
VPS16-207ENST00000481812 PCNTO95613 3336 aa23.87■■□□□ 1.41
VPS16-207ENST00000481812 STRNO43815 780 aa23.87■■□□□ 1.41
VPS16-207ENST00000481812 GJB2P29033 226 aa23.87■■□□□ 1.41
VPS16-207ENST00000481812 NCAPG2Q86XI2 1143 aa23.87■■□□□ 1.41
VPS16-207ENST00000481812 MCF2L2Q86YR7 1114 aa23.87■■□□□ 1.41
VPS16-207ENST00000481812 CLEC4DQ8WXI8 215 aa23.87■■□□□ 1.41
VPS16-207ENST00000481812 GPKOWQ92917 476 aaPredicted RBP eCLIP23.87■■□□□ 1.41
VPS16-207ENST00000481812 GLT8D2Q9H1C3 349 aa23.87■■□□□ 1.41
VPS16-207ENST00000481812 HSP90AA1P07900 732 aaKnown RBP23.86■■□□□ 1.41
VPS16-207ENST00000481812 NAPAP54920 295 aa23.86■■□□□ 1.41
VPS16-207ENST00000481812 CCAR1Q8IX12 1150 aaKnown RBP23.86■■□□□ 1.41
VPS16-207ENST00000481812 ABRAQ8N0Z2 381 aa23.86■■□□□ 1.41
VPS16-207ENST00000481812 ZMYND12Q9H0C1 365 aa23.86■■□□□ 1.41
VPS16-207ENST00000481812 PLXNB2O15031 1838 aa23.85■■□□□ 1.41
VPS16-207ENST00000481812 DOCK3Q8IZD9 2030 aa23.85■■□□□ 1.41
VPS16-207ENST00000481812 LACTBP83111 547 aaPredicted RBP23.85■■□□□ 1.41
VPS16-207ENST00000481812 MUM1L1Q5H9M0 696 aa23.85■■□□□ 1.41
VPS16-207ENST00000481812 GALNT17Q6IS24 598 aa23.85■■□□□ 1.41
VPS16-207ENST00000481812 TYW1BQ6NUM6 668 aa23.85■■□□□ 1.41
VPS16-207ENST00000481812 AIFM3Q96NN9 605 aa23.85■■□□□ 1.41
VPS16-207ENST00000481812 EFCC1Q9HA90 598 aa23.85■■□□□ 1.41
VPS16-207ENST00000481812 OPLAHO14841 1288 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 DTNBO60941 627 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 FKTNO75072 461 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 SLC4A3P48751 1232 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 KIF22Q14807 665 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 RIC8AQ9NPQ8 531 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 HOMER2Q9NSB8 354 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 VPS54Q9P1Q0 977 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 ZNF236Q9UL36 1845 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 PFASO15067 1338 aa23.84■■□□□ 1.41
VPS16-207ENST00000481812 SMCO2A6NFE2 343 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 PIK3CDO00329 1044 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 FCER1AP12319 257 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 PDIA4P13667 645 aaKnown RBP23.83■■□□□ 1.41
VPS16-207ENST00000481812 PDCP20941 246 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 CALML3P27482 149 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 GNA11P29992 359 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 MRPL12P52815 198 aaKnown RBP23.83■■□□□ 1.41
VPS16-207ENST00000481812 GPR142Q7Z601 462 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 PLEKHH3Q7Z736 793 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 SHISA4Q96DD7 197 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 PHF20Q9BVI0 1012 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 PSTPIP2Q9H939 334 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 CWC22Q9HCG8 908 aaKnown RBP23.83■■□□□ 1.41
VPS16-207ENST00000481812 C6orf50Q9HD87 102 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 IVNS1ABPQ9Y6Y0 642 aa23.83■■□□□ 1.41
VPS16-207ENST00000481812 NFIBO00712 420 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 TAL1P17542 331 aaPredicted RBP23.82■■□□□ 1.4
VPS16-207ENST00000481812 PTPREP23469 700 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 HSD17B4P51659 736 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 FCGRTP55899 365 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 TRIM29Q14134 588 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 DAGLBQ8NCG7 672 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 BICD2Q8TD16 824 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 CUL5Q93034 780 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 ERO1AQ96HE7 468 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 C8orf76Q96K31 380 aa23.82■■□□□ 1.4
VPS16-207ENST00000481812 SLC15A5A6NIM6 579 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 GNRH1P01148 92 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 ADCY7P51828 1080 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 NLRP5P59047 1200 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 KCTD2Q14681 263 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 ARHGEF6Q15052 776 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 MCTP2Q6DN12 878 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 FBXO18Q8NFZ0 1043 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 MMP19Q99542 508 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 A1CFQ9NQ94 594 aaKnown RBP23.81■■□□□ 1.4
VPS16-207ENST00000481812 CYP39A1Q9NYL5 469 aa23.81■■□□□ 1.4
VPS16-207ENST00000481812 GCOM1H8Y6P7 765 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms