RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 LETMD1Q6P1Q0 360 aa9.55□□□□□ -0.88
CBX3-206ENST00000481057 VPS37DQ86XT2 251 aa9.55□□□□□ -0.88
CBX3-206ENST00000481057 STRIP2Q9ULQ0 834 aa9.55□□□□□ -0.88
CBX3-206ENST00000481057 PNPLA7Q6ZV29 1317 aa9.55□□□□□ -0.88
CBX3-206ENST00000481057 IGSF1Q8N6C5 1336 aa9.55□□□□□ -0.88
CBX3-206ENST00000481057 ATP7BP35670 1465 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 PRR19A6NJB7 356 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 EOMESO95936 686 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 FXR1P51114 621 aaKnown RBP eCLIP9.54□□□□□ -0.88
CBX3-206ENST00000481057 EVA1CP58658 441 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 ARID5AQ03989 594 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 CDCP2Q5VXM1 449 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 FBXW10Q5XX13 1052 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 NLRC3Q7RTR2 1065 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 RBBP8NLQ8NC74 664 aaPredicted RBP9.54□□□□□ -0.88
CBX3-206ENST00000481057 ATG4CQ96DT6 458 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 SRRTQ9BXP5 876 aaKnown RBP9.54□□□□□ -0.88
CBX3-206ENST00000481057 MCOLN1Q9GZU1 580 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 CNNM2Q9H8M5 875 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 HFM1A2PYH4 1435 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 ERBINQ96RT1 1412 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 KIF1AQ12756 1690 aa9.54□□□□□ -0.88
CBX3-206ENST00000481057 KCPQ6ZWJ8 1503 aa9.53□□□□□ -0.88
CBX3-206ENST00000481057 FGRP09769 529 aa9.53□□□□□ -0.88
CBX3-206ENST00000481057 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
CBX3-206ENST00000481057 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
CBX3-206ENST00000481057 FAM214BQ7L5A3 538 aa9.53□□□□□ -0.88
CBX3-206ENST00000481057 LSRQ86X29 649 aaPredicted RBP9.53□□□□□ -0.88
CBX3-206ENST00000481057 DNAJB8Q8NHS0 232 aa9.53□□□□□ -0.88
CBX3-206ENST00000481057 PPP1R13LQ8WUF5 828 aa9.53□□□□□ -0.88
CBX3-206ENST00000481057 GMLQ99445 158 aa9.53□□□□□ -0.88
CBX3-206ENST00000481057 PARP4Q9UKK3 1724 aaKnown RBP9.53□□□□□ -0.88
CBX3-206ENST00000481057 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
CBX3-206ENST00000481057 CNTNAP1P78357 1384 aa9.52□□□□□ -0.88
CBX3-206ENST00000481057 TGFB1P01137 390 aa9.52□□□□□ -0.89
CBX3-206ENST00000481057 NME1P15531 152 aaKnown RBP9.52□□□□□ -0.89
CBX3-206ENST00000481057 RAG1P15918 1043 aa9.52□□□□□ -0.89
CBX3-206ENST00000481057 DNAJA1P31689 397 aaKnown RBP9.52□□□□□ -0.89
CBX3-206ENST00000481057 PHACTR4Q8IZ21 702 aa9.52□□□□□ -0.89
CBX3-206ENST00000481057 RIN3Q8TB24 985 aa9.52□□□□□ -0.89
CBX3-206ENST00000481057 SHDQ96IW2 340 aa9.52□□□□□ -0.89
CBX3-206ENST00000481057 PIM2Q9P1W9 311 aa9.52□□□□□ -0.89
CBX3-206ENST00000481057 LEMD3Q9Y2U8 911 aa9.52□□□□□ -0.89
CBX3-206ENST00000481057 THRAP3Q9Y2W1 955 aaKnown RBP9.52□□□□□ -0.89
CBX3-206ENST00000481057 SSH2Q76I76 1423 aa9.51□□□□□ -0.89
CBX3-206ENST00000481057 TNFRSF10CO14798 259 aa9.51□□□□□ -0.89
CBX3-206ENST00000481057 GIPRP48546 466 aa9.51□□□□□ -0.89
CBX3-206ENST00000481057 EIF6P56537 245 aaKnown RBP9.51□□□□□ -0.89
CBX3-206ENST00000481057 SOX10P56693 466 aa9.51□□□□□ -0.89
CBX3-206ENST00000481057 CCDC74BQ96LY2 380 aa9.51□□□□□ -0.89
CBX3-206ENST00000481057 HEXIM2Q96MH2 286 aaKnown RBP9.51□□□□□ -0.89
CBX3-206ENST00000481057 KIF2CQ99661 725 aa9.51□□□□□ -0.89
CBX3-206ENST00000481057 RGS13O14921 159 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 POLR2BP30876 1174 aaKnown RBP9.5□□□□□ -0.89
CBX3-206ENST00000481057 ZNF746Q6NUN9 644 aaPredicted RBP9.5□□□□□ -0.89
CBX3-206ENST00000481057 CDH24Q86UP0 819 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 MCF2L2Q86YR7 1114 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 TAB3Q8N5C8 712 aaPredicted RBP9.5□□□□□ -0.89
CBX3-206ENST00000481057 BAHD1Q8TBE0 780 aaPredicted RBP9.5□□□□□ -0.89
CBX3-206ENST00000481057 CPLX3Q8WVH0 158 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 CRBNQ96SW2 442 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.5□□□□□ -0.89
CBX3-206ENST00000481057 PRDM5Q9NQX1 630 aaPredicted RBP9.5□□□□□ -0.89
CBX3-206ENST00000481057 GTF2IRD1Q9UHL9 959 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 TPX2Q9ULW0 747 aaKnown RBP9.5□□□□□ -0.89
CBX3-206ENST00000481057 RNF112Q9ULX5 631 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 CEP131Q9UPN4 1083 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 MAPK8IP1Q9UQF2 711 aa9.5□□□□□ -0.89
CBX3-206ENST00000481057 IGF2BP3O00425 579 aaKnown RBP eCLIP9.49□□□□□ -0.89
CBX3-206ENST00000481057 FOSL1P15407 271 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 ETV3P41162 512 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 DDB1Q16531 1140 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 OR6P1Q8NGX9 317 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 TM9SF2Q99805 663 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 RRP7BPQ9NSQ0 103 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 TFCP2L1Q9NZI6 479 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 U3KQE9 123 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 KIAA0232Q92628 1395 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 PLEKHG2Q9H7P9 1386 aa9.49□□□□□ -0.89
CBX3-206ENST00000481057 NAIPQ13075 1403 aa9.48□□□□□ -0.89
CBX3-206ENST00000481057 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
CBX3-206ENST00000481057 UBOX5O94941 541 aa9.48□□□□□ -0.89
CBX3-206ENST00000481057 SSBP05455 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
CBX3-206ENST00000481057 ACRP10323 421 aa9.48□□□□□ -0.89
CBX3-206ENST00000481057 RUFY4Q6ZNE9 571 aa9.48□□□□□ -0.89
CBX3-206ENST00000481057 MARCH10Q8NA82 808 aaPredicted RBP9.48□□□□□ -0.89
CBX3-206ENST00000481057 LRRC4CQ9HCJ2 640 aa9.48□□□□□ -0.89
CBX3-206ENST00000481057 CNTNAP4Q9C0A0 1308 aa9.48□□□□□ -0.89
CBX3-206ENST00000481057 BCL9O00512 1426 aa9.48□□□□□ -0.89
CBX3-206ENST00000481057 CYP26A1O43174 497 aa9.47□□□□□ -0.89
CBX3-206ENST00000481057 GUCY2CP25092 1073 aa9.47□□□□□ -0.89
CBX3-206ENST00000481057 HOXA10P31260 410 aaPredicted RBP9.47□□□□□ -0.89
CBX3-206ENST00000481057 INTS3Q68E01 1043 aaKnown RBP9.47□□□□□ -0.89
CBX3-206ENST00000481057 ARHGAP27Q6ZUM4 889 aa9.47□□□□□ -0.89
CBX3-206ENST00000481057 C22orf34Q6ZV56 151 aa9.47□□□□□ -0.89
CBX3-206ENST00000481057 FAM181AQ8N9Y4 354 aa9.47□□□□□ -0.89
CBX3-206ENST00000481057 SLC9A7Q96T83 725 aa9.47□□□□□ -0.89
CBX3-206ENST00000481057 TNRC6CQ9HCJ0 1690 aaKnown RBP9.47□□□□□ -0.89
CBX3-206ENST00000481057 GBP1P32455 592 aa9.46□□□□□ -0.9
CBX3-206ENST00000481057 CCNFP41002 786 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms