RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 PLEKHH3Q7Z736 793 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 CCDC83Q8IWF9 413 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 ABRAQ8N0Z2 381 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 NSUN7Q8NE18 718 aaKnown RBP14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 CLEC4DQ8WXI8 215 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 TRIM47Q96LD4 638 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 LLPHQ9BRT6 129 aaKnown RBP14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 ARHGAP39Q9C0H5 1083 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 MAF1Q9H063 256 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 RNF146Q9NTX7 359 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 PCDHA1Q9Y5I3 950 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 ABCB11O95342 1321 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 RBBP6Q7Z6E9 1792 aaKnown RBP14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 ZNF236Q9UL36 1845 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 PLXNA1Q9UIW2 1896 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 SLC15A5A6NIM6 579 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 GNRH1P01148 92 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 TAL1P17542 331 aaPredicted RBP14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 PTPREP23469 700 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 AKAP17AQ02040 695 aaKnown RBP14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 PFKFB3Q16875 520 aaPredicted RBP14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 USH1GQ495M9 461 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 MUM1L1Q5H9M0 696 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 TRIM22Q8IYM9 498 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 RGS22Q8NE09 1264 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 COA7Q96BR5 231 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 SLC26A6Q9BXS9 759 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 ACAD9Q9H845 621 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 GJD2Q9UKL4 321 aa14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 MRPL11Q9Y3B7 192 aaKnown RBP14.3□□□□□ -0.12
SHROOM3-205ENST00000481002 hCG_1984214I3L0E3 225 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 TNPO2O14787 897 aaKnown RBP14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 DEXIO95424 95 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 FCER1AP12319 257 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 SCG2P13521 617 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 HOXD10P28358 340 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 CUL4AQ13619 759 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 MORN1Q5T089 497 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 WDR78Q5VTH9 848 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 SMARCC2Q8TAQ2 1214 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 USP6NLQ92738 828 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 PRDM10Q9NQV6 1147 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 HOMER2Q9NSB8 354 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 BARHL2Q9NY43 387 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 IVNS1ABPQ9Y6Y0 642 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
SHROOM3-205ENST00000481002 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 NFIBO00712 420 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 OPLAHO14841 1288 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 PPFIA3O75145 1194 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 ECM2O94769 699 aaPredicted RBP14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 LCTP09848 1927 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 FDPSP14324 419 aaKnown RBP14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 GRB14Q14449 540 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 WWC2Q6AWC2 1192 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 SAMD3Q8N6K7 520 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 MMP19Q99542 508 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 NUDT12Q9BQG2 462 aa14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 CWC22Q9HCG8 908 aaKnown RBP14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
SHROOM3-205ENST00000481002 PFASO15067 1338 aa14.27□□□□□ -0.12
SHROOM3-205ENST00000481002 DNAJC25-GNG10A0A024R161 153 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 STXBP3O00186 592 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 JAK2O60674 1132 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 PRMT2P55345 433 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 GHRHRQ02643 423 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 KCTD2Q14681 263 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 TYW1BQ6NUM6 668 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 OTOP1Q7RTM1 612 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 HEATR3Q7Z4Q2 680 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 MCF2L2Q86YR7 1114 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 ANKRD35Q8N283 1001 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 TBC1D5Q92609 795 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 GPKOWQ92917 476 aaPredicted RBP eCLIP14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 A1CFQ9NQ94 594 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 SH3GLB2Q9NR46 395 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 MAP3K20Q9NYL2 800 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 SRRDQ9UH36 339 aa14.27□□□□□ -0.13
SHROOM3-205ENST00000481002 DTNBO60941 627 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 HOXC6P09630 235 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 ADORA2AP29274 412 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 HMGN5P82970 282 aaKnown RBP14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 MAP2K5Q13163 448 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 PPP1R18Q6NYC8 613 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 TEX2Q8IWB9 1127 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 FAM177A1Q8N128 213 aaPredicted RBP14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 SOCS4Q8WXH5 440 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 WASF1Q92558 559 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 DDX11Q96FC9 970 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 CYP39A1Q9NYL5 469 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 GABRQQ9UN88 632 aa14.26□□□□□ -0.13
SHROOM3-205ENST00000481002 ESYT2A0FGR8 921 aa14.25□□□□□ -0.13
SHROOM3-205ENST00000481002 COBLO75128 1261 aa14.25□□□□□ -0.13
SHROOM3-205ENST00000481002 XRCC5P13010 732 aaKnown RBP14.25□□□□□ -0.13
SHROOM3-205ENST00000481002 FLT3LGP49771 235 aa14.25□□□□□ -0.13
SHROOM3-205ENST00000481002 HSD17B4P51659 736 aa14.25□□□□□ -0.13
SHROOM3-205ENST00000481002 NAPAP54920 295 aa14.25□□□□□ -0.13
SHROOM3-205ENST00000481002 RPS6P62753 249 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms