RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 RCAN1P53805 252 aa17.57■□□□□ 0.4
ABCF3-213ENST00000480539 DPP9Q86TI2 863 aa17.57■□□□□ 0.4
ABCF3-213ENST00000480539 FBXO11Q86XK2 927 aa17.57■□□□□ 0.4
ABCF3-213ENST00000480539 ANKRD35Q8N283 1001 aa17.57■□□□□ 0.4
ABCF3-213ENST00000480539 TRIB2Q92519 343 aa17.57■□□□□ 0.4
ABCF3-213ENST00000480539 hCG_1642624A0A1W2PR95 340 aa17.56■□□□□ 0.4
ABCF3-213ENST00000480539 MYCP01106 439 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-213ENST00000480539 RBM25P49756 843 aaKnown RBP17.56■□□□□ 0.4
ABCF3-213ENST00000480539 AK2P54819 239 aa17.56■□□□□ 0.4
ABCF3-213ENST00000480539 NSMFQ6X4W1 530 aa17.56■□□□□ 0.4
ABCF3-213ENST00000480539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.56■□□□□ 0.4
ABCF3-213ENST00000480539 LZTS2Q9BRK4 669 aa17.56■□□□□ 0.4
ABCF3-213ENST00000480539 BACH2Q9BYV9 841 aa17.56■□□□□ 0.4
ABCF3-213ENST00000480539 NCOA5Q9HCD5 579 aaKnown RBP17.56■□□□□ 0.4
ABCF3-213ENST00000480539 A1CFQ9NQ94 594 aaKnown RBP17.56■□□□□ 0.4
ABCF3-213ENST00000480539 FAM217BQ9NTX9 383 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-213ENST00000480539 FLRT1Q9NZU1 646 aa17.56■□□□□ 0.4
ABCF3-213ENST00000480539 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-213ENST00000480539 MYH6P13533 1939 aa17.56■□□□□ 0.4
ABCF3-213ENST00000480539 ABCB11O95342 1321 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 HMGCRP04035 888 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 INHAP05111 366 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 PDIA3P30101 505 aaKnown RBP17.55■□□□□ 0.4
ABCF3-213ENST00000480539 NEK4P51957 841 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 CCT2P78371 535 aaKnown RBP17.55■□□□□ 0.4
ABCF3-213ENST00000480539 TRIM32Q13049 653 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 STK3Q13188 491 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 PXYLP1Q8TE99 480 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 RRP36Q96EU6 259 aaKnown RBP17.55■□□□□ 0.4
ABCF3-213ENST00000480539 DDX11Q96FC9 970 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 KIF2CQ99661 725 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 AMNQ9BXJ7 453 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
ABCF3-213ENST00000480539 PNMA2Q9UL42 364 aa17.55■□□□□ 0.4
ABCF3-213ENST00000480539 PLXNA1Q9UIW2 1896 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 PFASO15067 1338 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 SMCHD1A6NHR9 2005 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 PNMA6FA0A0J9YX94 578 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 HOXC6P09630 235 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 XRCC5P13010 732 aaKnown RBP17.54■□□□□ 0.4
ABCF3-213ENST00000480539 ADD1P35611 737 aaKnown RBP17.54■□□□□ 0.4
ABCF3-213ENST00000480539 CLEC4DQ8WXI8 215 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 ARMC5Q96C12 935 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 ZNF333Q96JL9 665 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 SLC5A4Q9NY91 659 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 LCTP09848 1927 aa17.54■□□□□ 0.4
ABCF3-213ENST00000480539 POTEB2H3BUK9 544 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 EVCP57679 992 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 CNTN2Q02246 1040 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 FUT2Q10981 343 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 ZNF792Q3KQV3 632 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 CYP39A1Q9NYL5 469 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 TPCN1Q9ULQ1 816 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 PCDHA1Q9Y5I3 950 aa17.53■□□□□ 0.4
ABCF3-213ENST00000480539 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
ABCF3-213ENST00000480539 DNAJC25-GNG10A0A024R161 153 aa17.52■□□□□ 0.4
ABCF3-213ENST00000480539 CCDC196A0A1B0GTZ2 297 aa17.52■□□□□ 0.4
ABCF3-213ENST00000480539 PPFIA3O75145 1194 aa17.52■□□□□ 0.4
ABCF3-213ENST00000480539 SMARCA1P28370 1054 aa17.52■□□□□ 0.4
ABCF3-213ENST00000480539 UBXN2AP68543 259 aa17.52■□□□□ 0.4
ABCF3-213ENST00000480539 BAATQ14032 418 aaPredicted RBP17.52■□□□□ 0.4
ABCF3-213ENST00000480539 ANKRD1Q15327 319 aa17.52■□□□□ 0.4
ABCF3-213ENST00000480539 MTFR1Q15390 333 aa17.52■□□□□ 0.4
ABCF3-213ENST00000480539 TRMT44Q8IYL2 757 aaKnown RBP17.52■□□□□ 0.4
ABCF3-213ENST00000480539 FGD4Q96M96 766 aa17.52■□□□□ 0.4
ABCF3-213ENST00000480539 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.4
ABCF3-213ENST00000480539 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.4
ABCF3-213ENST00000480539 LRRC37A2A6NM11 1700 aa17.51■□□□□ 0.39
ABCF3-213ENST00000480539 OPLAHO14841 1288 aa17.51■□□□□ 0.39
ABCF3-213ENST00000480539 LARGE1O95461 756 aa17.51■□□□□ 0.39
ABCF3-213ENST00000480539 PRKAR2AP13861 404 aaKnown RBP17.51■□□□□ 0.39
ABCF3-213ENST00000480539 CALML3P27482 149 aa17.51■□□□□ 0.39
ABCF3-213ENST00000480539 CYP2C19P33261 490 aa17.51■□□□□ 0.39
ABCF3-213ENST00000480539 CENPFP49454 3210 aa17.51■□□□□ 0.39
ABCF3-213ENST00000480539 OLFML2BQ68BL8 750 aa17.51■□□□□ 0.39
ABCF3-213ENST00000480539 GPKOWQ92917 476 aaPredicted RBP eCLIP17.51■□□□□ 0.39
ABCF3-213ENST00000480539 PHKBQ93100 1093 aa17.51■□□□□ 0.39
ABCF3-213ENST00000480539 ZNF274Q96GC6 653 aaPredicted RBP17.51■□□□□ 0.39
ABCF3-213ENST00000480539 PURBQ96QR8 312 aaKnown RBP17.51■□□□□ 0.39
ABCF3-213ENST00000480539 ZNFX1Q9P2E3 1918 aaKnown RBP17.51■□□□□ 0.39
ABCF3-213ENST00000480539 ASTN1O14525 1302 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 CCDC85CA6NKD9 419 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 RPS6P62753 249 aaKnown RBP17.5■□□□□ 0.39
ABCF3-213ENST00000480539 CACNB2Q08289 660 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-213ENST00000480539 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 MFSD14CQ5VZR4 134 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 RNF207Q6ZRF8 634 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 HEATR3Q7Z4Q2 680 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 FAM133AQ8N9E0 248 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 TBC1D5Q92609 795 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
ABCF3-213ENST00000480539 DDX49Q9Y6V7 483 aaKnown RBP17.5■□□□□ 0.39
ABCF3-213ENST00000480539 SOWAHBA6NEL2 793 aa17.49■□□□□ 0.39
ABCF3-213ENST00000480539 CFBP00751 764 aa17.49■□□□□ 0.39
ABCF3-213ENST00000480539 CCL5P13501 91 aa17.49■□□□□ 0.39
ABCF3-213ENST00000480539 SCRN1Q12765 414 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms