RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 MMGT1Q8N4V1 131 aa23.08■■□□□ 1.28
COL13A1-208ENST00000479733 CNOT6LQ96LI5 555 aaKnown RBP23.08■■□□□ 1.28
COL13A1-208ENST00000479733 OSBPL9Q96SU4 736 aa23.08■■□□□ 1.28
COL13A1-208ENST00000479733 SH3GL2Q99962 352 aa23.08■■□□□ 1.28
COL13A1-208ENST00000479733 IFT81Q8WYA0 676 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 DUSP9Q99956 384 aaKnown RBP23.07■■□□□ 1.28
COL13A1-208ENST00000479733 MAGEB6P1A0A0J9YX57 407 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 USO1O60763 962 aaKnown RBP23.07■■□□□ 1.28
COL13A1-208ENST00000479733 NAP1L1P55209 391 aaKnown RBP23.07■■□□□ 1.28
COL13A1-208ENST00000479733 PPP2R5BQ15173 497 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 CCDC178Q5BJE1 867 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 ANKRD40Q6AI12 368 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 TRIM58Q8NG06 486 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 HPS3Q969F9 1004 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 MS4A14Q96JA4 679 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 ZIM3Q96PE6 472 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 MTMR7Q9Y216 660 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 MROH5Q6ZUA9 1318 aa23.07■■□□□ 1.28
COL13A1-208ENST00000479733 SCG2P13521 617 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 UBA7P41226 1012 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 GBP6Q6ZN66 633 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 PYM1Q9BRP8 204 aaKnown RBP23.06■■□□□ 1.28
COL13A1-208ENST00000479733 RBM28Q9NW13 759 aaKnown RBP23.06■■□□□ 1.28
COL13A1-208ENST00000479733 PCDHA13Q9Y5I0 950 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 CNTNAP5Q8WYK1 1306 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 CHD4Q14839 1912 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 ZSCAN5CA6NGD5 496 aaPredicted RBP23.06■■□□□ 1.28
COL13A1-208ENST00000479733 STARD3NLO95772 234 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 GUCY1A3Q02108 690 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 NNTQ13423 1086 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 FNBP4Q8N3X1 1017 aaPredicted RBP23.06■■□□□ 1.28
COL13A1-208ENST00000479733 OTUD6BQ8N6M0 293 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 PURBQ96QR8 312 aaKnown RBP23.06■■□□□ 1.28
COL13A1-208ENST00000479733 STIM2Q9P246 746 aa23.06■■□□□ 1.28
COL13A1-208ENST00000479733 TRPM3Q9HCF6 1732 aaPredicted RBP23.06■■□□□ 1.28
COL13A1-208ENST00000479733 KLRC4O43908 158 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 APBA1Q02410 837 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 CCDC91Q7Z6B0 441 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 BUB1O43683 1085 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 KIAA0754O94854 1291 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 LONP1P36776 959 aaKnown RBP23.05■■□□□ 1.28
COL13A1-208ENST00000479733 EPHB4P54760 987 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 ATP2B2Q01814 1243 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 HAUS3Q68CZ6 603 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 DTHD1Q6ZMT9 781 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 PAXIP1Q6ZW49 1069 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-208ENST00000479733 MTA3Q9BTC8 594 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 TMEM60Q9H2L4 133 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 RBM12Q9NTZ6 932 aaKnown RBP23.05■■□□□ 1.28
COL13A1-208ENST00000479733 FAM205AQ6ZU69 1335 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 EPHB6O15197 1021 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 AKR1B10O60218 316 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 GUCY2FP51841 1108 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 RNASE9P60153 205 aaKnown RBP23.05■■□□□ 1.28
COL13A1-208ENST00000479733 C8orf74Q6P047 294 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 CEP89Q96ST8 783 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 NUP58Q9BVL2 599 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
COL13A1-208ENST00000479733 EIF4A3P38919 411 aaKnown RBP23.04■■□□□ 1.28
COL13A1-208ENST00000479733 ZNF662Q6ZS27 426 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 POTEDQ86YR6 584 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 CCDC43Q96MW1 224 aaKnown RBP23.04■■□□□ 1.28
COL13A1-208ENST00000479733 ARHGAP20Q9P2F6 1191 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 FAM153BP0C7A2 387 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 FCER1AP12319 257 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 FAM153CQ494X1 144 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 LRRC15Q8TF66 581 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 SH2D4AQ9H788 454 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 MMRN2Q9H8L6 949 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 FAM153AQ9UHL3 310 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 SALL4Q9UJQ4 1053 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 NFU1Q9UMS0 254 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 MYH10P35580 1976 aa23.04■■□□□ 1.28
COL13A1-208ENST00000479733 WTIPA6NIX2 430 aaPredicted RBP23.03■■□□□ 1.28
COL13A1-208ENST00000479733 ATF3P18847 181 aa23.03■■□□□ 1.28
COL13A1-208ENST00000479733 IBSPP21815 317 aaPredicted RBP23.03■■□□□ 1.28
COL13A1-208ENST00000479733 PDE4DQ08499 809 aa23.03■■□□□ 1.28
COL13A1-208ENST00000479733 STK4Q13043 487 aa23.03■■□□□ 1.28
COL13A1-208ENST00000479733 RNF187Q5TA31 235 aaPredicted RBP23.03■■□□□ 1.28
COL13A1-208ENST00000479733 C4orf32Q8N8J7 132 aa23.03■■□□□ 1.28
COL13A1-208ENST00000479733 GIMAP8Q8ND71 665 aaPredicted RBP23.03■■□□□ 1.28
COL13A1-208ENST00000479733 PAFAH1B1P43034 410 aa23.03■■□□□ 1.28
COL13A1-208ENST00000479733 CARSP49589 748 aaKnown RBP23.03■■□□□ 1.28
COL13A1-208ENST00000479733 KIF11P52732 1056 aa23.03■■□□□ 1.28
COL13A1-208ENST00000479733 SWT1Q5T5J6 900 aaKnown RBP23.03■■□□□ 1.28
COL13A1-208ENST00000479733 RNPC3Q96LT9 517 aaKnown RBP23.03■■□□□ 1.28
COL13A1-208ENST00000479733 TSGA10Q9BZW7 698 aa23.03■■□□□ 1.28
COL13A1-208ENST00000479733 SEC24CP53992 1094 aa23.02■■□□□ 1.28
COL13A1-208ENST00000479733 KCTD19Q17RG1 926 aaPredicted RBP23.02■■□□□ 1.28
COL13A1-208ENST00000479733 MIIPQ5JXC2 388 aa23.02■■□□□ 1.28
COL13A1-208ENST00000479733 P2RX5Q93086 422 aa23.02■■□□□ 1.28
COL13A1-208ENST00000479733 HYOU1Q9Y4L1 999 aa23.02■■□□□ 1.28
COL13A1-208ENST00000479733 USP17L12C9JPN9 530 aa23.02■■□□□ 1.27
COL13A1-208ENST00000479733 USP17L21D6R901 530 aa23.02■■□□□ 1.27
COL13A1-208ENST00000479733 GLI1P08151 1106 aa23.02■■□□□ 1.27
COL13A1-208ENST00000479733 TRAPPC10P48553 1259 aa23.02■■□□□ 1.27
COL13A1-208ENST00000479733 TMC4Q7Z404 712 aa23.02■■□□□ 1.27
COL13A1-208ENST00000479733 PIGBQ92521 554 aa23.02■■□□□ 1.27
COL13A1-208ENST00000479733 JPH2Q9BR39 696 aaPredicted RBP23.02■■□□□ 1.27
COL13A1-208ENST00000479733 CENPHQ9H3R5 247 aa23.02■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms