RNA–Protein interactions for RNA: ENST00000479635.1

VSIG1-204, Transcript of V-set and immunoglobulin domain containing 1, human

TSL 3

Gene VSIG1, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VSIG1-204	ENST00000479635	BCAS3	Q9H6U6	928 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	FBXL21	Q9UKT6	434 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	INVS	Q9Y283	1065 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	TSC22D4	Q9Y3Q8	395 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	GSTM1	P09488	218 aa		4.92	□□□□□ -1.62
VSIG1-204	ENST00000479635	RAD51AP2	Q09MP3	1159 aa		4.92	□□□□□ -1.62
VSIG1-204	ENST00000479635	RGL3	Q3MIN7	710 aa		4.92	□□□□□ -1.62
VSIG1-204	ENST00000479635	USP48	Q86UV5	1035 aa		4.92	□□□□□ -1.62
VSIG1-204	ENST00000479635	LGI4	Q8N135	537 aa		4.92	□□□□□ -1.62
VSIG1-204	ENST00000479635	SMARCC2	Q8TAQ2	1214 aa		4.92	□□□□□ -1.62
VSIG1-204	ENST00000479635	PDLIM7	Q9NR12	457 aa		4.92	□□□□□ -1.62
VSIG1-204	ENST00000479635	CLEC3A	O75596	197 aa		4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	PML	P29590	882 aa		4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	KLF10	Q13118	480 aa		4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	SMAD4	Q13485	552 aa	Known RBP	4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	CDSN	Q15517	529 aa		4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	RTP2	Q5QGT7	225 aa		4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	NOC4L	Q9BVI4	516 aa	Known RBP	4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	MKRN2	Q9H000	416 aa	Known RBP	4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	RXFP1	Q9HBX9	757 aa		4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	RNF19A	Q9NV58	838 aa		4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	ING1	Q9UK53	422 aa	Predicted RBP	4.91	□□□□□ -1.62
VSIG1-204	ENST00000479635	SMARCA5	O60264	1052 aa	Predicted RBP	4.9	□□□□□ -1.63
VSIG1-204	ENST00000479635	KIAA2012	Q0VF49	1180 aa		4.9	□□□□□ -1.63
VSIG1-204	ENST00000479635	REC114	Q7Z4M0	266 aa		4.9	□□□□□ -1.63
VSIG1-204	ENST00000479635	PALM2	Q8IXS6	379 aa		4.9	□□□□□ -1.63
VSIG1-204	ENST00000479635	FBXO27	Q8NI29	283 aa		4.9	□□□□□ -1.63
VSIG1-204	ENST00000479635	DSCC1	Q9BVC3	393 aa		4.9	□□□□□ -1.63
VSIG1-204	ENST00000479635	GNE	Q9Y223	722 aa	Known RBP	4.9	□□□□□ -1.63
VSIG1-204	ENST00000479635	PCDHB12	Q9Y5F1	795 aa		4.9	□□□□□ -1.63
VSIG1-204	ENST00000479635	FAM160A1	Q05DH4	1040 aa		4.89	□□□□□ -1.63
VSIG1-204	ENST00000479635	TAF1C	Q15572	869 aa	Predicted RBP	4.89	□□□□□ -1.63
VSIG1-204	ENST00000479635	BORA	Q6PGQ7	559 aa		4.89	□□□□□ -1.63
VSIG1-204	ENST00000479635	FAM124A	Q86V42	546 aa		4.89	□□□□□ -1.63
VSIG1-204	ENST00000479635	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.89	□□□□□ -1.63
VSIG1-204	ENST00000479635	KLC2	Q9H0B6	622 aa		4.89	□□□□□ -1.63
VSIG1-204	ENST00000479635	PRPF40A	O75400	957 aa	Known RBP	4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	GSN	P06396	782 aa		4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	GBP2	P32456	591 aa	Predicted RBP	4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	MPP2	Q14168	576 aa		4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	ICAM4	Q14773	271 aa		4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	SNAP47	Q5SQN1	464 aa		4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	OVOS1	Q6IE37	1185 aa		4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	DDX11	Q96FC9	970 aa		4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	DUSP9	Q99956	384 aa	Known RBP	4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	GMIP	Q9P107	970 aa		4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	C11orf21	Q9P2W6	132 aa		4.88	□□□□□ -1.63
VSIG1-204	ENST00000479635	MROH6	A6NGR9	719 aa		4.87	□□□□□ -1.63
VSIG1-204	ENST00000479635	TLR3	O15455	904 aa	Known RBP	4.87	□□□□□ -1.63
VSIG1-204	ENST00000479635	CWF19L1	Q69YN2	538 aa	Known RBP	4.87	□□□□□ -1.63
VSIG1-204	ENST00000479635	ZNF585A	Q6P3V2	769 aa		4.87	□□□□□ -1.63
VSIG1-204	ENST00000479635	GOLM1	Q8NBJ4	401 aa		4.87	□□□□□ -1.63
VSIG1-204	ENST00000479635	RHOV	Q96L33	236 aa		4.87	□□□□□ -1.63
VSIG1-204	ENST00000479635	SLC12A9	Q9BXP2	914 aa		4.87	□□□□□ -1.63
VSIG1-204	ENST00000479635	PCDHB14	Q9Y5E9	798 aa		4.87	□□□□□ -1.63
VSIG1-204	ENST00000479635	ST13	P50502	369 aa	Known RBP	4.86	□□□□□ -1.63
VSIG1-204	ENST00000479635	CACNB2	Q08289	660 aa	Predicted RBP	4.86	□□□□□ -1.63
VSIG1-204	ENST00000479635	PDE4C	Q08493	712 aa		4.86	□□□□□ -1.63
VSIG1-204	ENST00000479635	AUH	Q13825	339 aa	Known RBP	4.86	□□□□□ -1.63
VSIG1-204	ENST00000479635	MCTP2	Q6DN12	878 aa		4.86	□□□□□ -1.63
VSIG1-204	ENST00000479635	CYP2R1	Q6VVX0	501 aa		4.86	□□□□□ -1.63
VSIG1-204	ENST00000479635	RELL1	Q8IUW5	271 aa		4.86	□□□□□ -1.63
VSIG1-204	ENST00000479635	DEF6	Q9H4E7	631 aa		4.86	□□□□□ -1.63
VSIG1-204	ENST00000479635	MINDY4B	A8MYZ0	360 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	CORO7	P57737	925 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	TGFB2	P61812	414 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	CDCP2	Q5VXM1	449 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	CABP7	Q86V35	215 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	TMEM192	Q8IY95	271 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	RGS22	Q8NE09	1264 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	CPA5	Q8WXQ8	436 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	TSPAN17	Q96FV3	270 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	TMEM74	Q96NL1	305 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	CNNM2	Q9H8M5	875 aa		4.85	□□□□□ -1.63
VSIG1-204	ENST00000479635	LTBP3	Q9NS15	1303 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	FGF10	O15520	208 aa	Predicted RBP	4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	LAMTOR5	O43504	91 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	GLI4	P10075	376 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	CYP2C8	P10632	490 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	L1CAM	P32004	1257 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	FHL2	Q14192	279 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	CWF19L2	Q2TBE0	894 aa	Known RBP	4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	NLRC3	Q7RTR2	1065 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	LINC00482	Q8N8I6	264 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	ATG4C	Q96DT6	458 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	SLC6A18	Q96N87	628 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	ZNF341	Q9BYN7	854 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	WDR26	Q9H7D7	661 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	BRMS1	Q9HCU9	246 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	PPP4R1L	Q9P1A2	415 aa		4.84	□□□□□ -1.63
VSIG1-204	ENST00000479635	NPEPPSL1	A6NEC2	478 aa		4.83	□□□□□ -1.64
VSIG1-204	ENST00000479635		H0Y8X5	98 aa		4.83	□□□□□ -1.64
VSIG1-204	ENST00000479635	TBC1D8	O95759	1140 aa		4.83	□□□□□ -1.64
VSIG1-204	ENST00000479635	RPL13	P26373	211 aa	Known RBP	4.83	□□□□□ -1.64
VSIG1-204	ENST00000479635	THBS2	P35442	1172 aa		4.83	□□□□□ -1.64
VSIG1-204	ENST00000479635	CCNF	P41002	786 aa		4.83	□□□□□ -1.64
VSIG1-204	ENST00000479635	SMN1	Q16637	294 aa	Known RBP	4.83	□□□□□ -1.64
VSIG1-204	ENST00000479635	FAM26F	Q5R3K3	315 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms