RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CLTBP09497 229 aa16.85■□□□□ 0.29
ATG4B-218ENST00000479554 C6orf222P0C671 652 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-218ENST00000479554 PDHBP11177 359 aa16.85■□□□□ 0.29
ATG4B-218ENST00000479554 NSMFQ6X4W1 530 aa16.85■□□□□ 0.29
ATG4B-218ENST00000479554 KATNBL1Q9H079 304 aa16.85■□□□□ 0.29
ATG4B-218ENST00000479554 CYP39A1Q9NYL5 469 aa16.85■□□□□ 0.29
ATG4B-218ENST00000479554 COL6A3P12111 3177 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 MYADML2A6NDP7 307 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 CST5P28325 142 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-218ENST00000479554 NT5C2P49902 561 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 KCNA10Q16322 511 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 SH3RF1Q7Z6J0 888 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 PCSK9Q8NBP7 692 aaKnown RBP16.84■□□□□ 0.29
ATG4B-218ENST00000479554 BADQ92934 168 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 GLT1D1Q96MS3 346 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
ATG4B-218ENST00000479554 UPF3AQ9H1J1 476 aaKnown RBP16.84■□□□□ 0.29
ATG4B-218ENST00000479554 TRIM43BA6NCK2 446 aa16.83■□□□□ 0.28
ATG4B-218ENST00000479554 ASTN1O14525 1302 aa16.83■□□□□ 0.28
ATG4B-218ENST00000479554 GJA9P57773 515 aa16.83■□□□□ 0.28
ATG4B-218ENST00000479554 ZNF543Q08ER8 600 aa16.83■□□□□ 0.28
ATG4B-218ENST00000479554 IMMTQ16891 758 aaKnown RBP16.83■□□□□ 0.28
ATG4B-218ENST00000479554 CCSAPQ6IQ19 270 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-218ENST00000479554 IQCA1Q86XH1 822 aa16.83■□□□□ 0.28
ATG4B-218ENST00000479554 TRIM43Q96BQ3 446 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-218ENST00000479554 ASGR1P07306 291 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 IRX5P78411 483 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-218ENST00000479554 TNFAIP2Q03169 654 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 CCDC178Q5BJE1 867 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 NOL8Q76FK4 1167 aaKnown RBP16.82■□□□□ 0.28
ATG4B-218ENST00000479554 DGKHQ86XP1 1220 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 DEFB123Q8N688 67 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 PNMA2Q9UL42 364 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 LCTP09848 1927 aa16.82■□□□□ 0.28
ATG4B-218ENST00000479554 ELP1O95163 1332 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 MROH7Q68CQ1 1323 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-218ENST00000479554 DCDC2CA8MYV0 355 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 B4E1Z4 1266 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 NFIBO00712 420 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 KDM4AO75164 1064 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 PDE4AP27815 886 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 BAATQ14032 418 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-218ENST00000479554 GNASQ5JWF2 1037 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 GPATCH4Q5T3I0 446 aaKnown RBP16.81■□□□□ 0.28
ATG4B-218ENST00000479554 Q7L0L9 218 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 ANKRD33Q7Z3H0 272 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 FBXO16Q8IX29 292 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-218ENST00000479554 VTI1AQ96AJ9 217 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 TOX2Q96NM4 488 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 TMEM39AQ9NV64 488 aa16.81■□□□□ 0.28
ATG4B-218ENST00000479554 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
ATG4B-218ENST00000479554 WDR19Q8NEZ3 1342 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 PTPDC1A2A3K4 754 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 KIAA0355O15063 1070 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 GSPT1P15170 499 aaKnown RBP16.8■□□□□ 0.28
ATG4B-218ENST00000479554 RAG1P15918 1043 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 EEPD1Q7L9B9 569 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 TLK2Q86UE8 772 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 PNMA1Q8ND90 353 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 PURBQ96QR8 312 aaKnown RBP16.8■□□□□ 0.28
ATG4B-218ENST00000479554 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
ATG4B-218ENST00000479554 ADD3Q9UEY8 706 aaKnown RBP16.8■□□□□ 0.28
ATG4B-218ENST00000479554 TNKSO95271 1327 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 RAD50Q92878 1312 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 A0A0U1RQG5 324 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-218ENST00000479554 GOLGA8HP0CJ92 632 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 ITGB8P26012 769 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 ALDH5A1P51649 535 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-218ENST00000479554 NKX3-2P78367 333 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 BEX3Q00994 111 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 FAAP100Q0VG06 881 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 SHHQ15465 462 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 C9orf50Q5SZB4 431 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 SLC30A10Q6XR72 485 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 ZSCAN10Q96SZ4 725 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-218ENST00000479554 KRT23Q9C075 422 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 AP5M1Q9H0R1 490 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 CNNM2Q9H8M5 875 aa16.79■□□□□ 0.28
ATG4B-218ENST00000479554 GNEQ9Y223 722 aaKnown RBP16.79■□□□□ 0.28
ATG4B-218ENST00000479554 LOC102724159A0A0B4J2E5 919 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 CTAGE5O15320 804 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 SMPD1P17405 629 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 CALML3P27482 149 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 PWP2Q15269 919 aaKnown RBP16.78■□□□□ 0.28
ATG4B-218ENST00000479554 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
ATG4B-218ENST00000479554 IQSEC1Q6DN90 963 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 TAPT1Q6NXT6 567 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 RNF207Q6ZRF8 634 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 ENAHQ8N8S7 591 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-218ENST00000479554 MORC4Q8TE76 937 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 CLEC4DQ8WXI8 215 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 UBA5Q9GZZ9 404 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 IL25Q9H293 177 aa16.78■□□□□ 0.28
ATG4B-218ENST00000479554 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms