RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 MCM3APO60318 1980 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 ASTN1O14525 1302 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 ORC4O43929 436 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 CSF2RAP15509 400 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 RAB30Q15771 203 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 TAPT1Q6NXT6 567 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 AGBL1Q96MI9 1066 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 MAF1Q9H063 256 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 VTA1Q9NP79 307 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 IL17RBQ9NRM6 502 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 CYP39A1Q9NYL5 469 aa15.76■□□□□ 0.11
ABCF1-206ENST00000479542 MCCP23508 829 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 IRX5P78411 483 aaPredicted RBP15.75■□□□□ 0.11
ABCF1-206ENST00000479542 ITGA7Q13683 1181 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 FSCN1Q16658 493 aaKnown RBP15.75■□□□□ 0.11
ABCF1-206ENST00000479542 TJAP1Q5JTD0 557 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 ZNF365Q70YC5 407 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 TLK2Q86UE8 772 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 SEC62Q99442 399 aaKnown RBP15.75■□□□□ 0.11
ABCF1-206ENST00000479542 PBX4Q9BYU1 374 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 AP5M1Q9H0R1 490 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 PRR12Q9ULL5 1215 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 MUC3AQ02505 3323 aa15.75■□□□□ 0.11
ABCF1-206ENST00000479542 TTC28Q96AY4 2481 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 SALL3Q9BXA9 1300 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.74■□□□□ 0.11
ABCF1-206ENST00000479542 RBM47A0AV96 593 aaKnown RBP15.74■□□□□ 0.11
ABCF1-206ENST00000479542 TSPY2A6NKD2 308 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 FOXP2O15409 715 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 FGBP02675 491 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 ICAM1P05362 532 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 NT5C2P49902 561 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 TSHZ3Q63HK5 1081 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
ABCF1-206ENST00000479542 DCAF4Q8WV16 495 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 ATXN2LQ8WWM7 1075 aaKnown RBP15.74■□□□□ 0.11
ABCF1-206ENST00000479542 GAS2L1Q99501 681 aaPredicted RBP15.74■□□□□ 0.11
ABCF1-206ENST00000479542 FSD1Q9BTV5 496 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 RANBP17Q9H2T7 1088 aaKnown RBP15.74■□□□□ 0.11
ABCF1-206ENST00000479542 PRDM6Q9NQX0 595 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 HOMER2Q9NSB8 354 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 ADD3Q9UEY8 706 aaKnown RBP15.74■□□□□ 0.11
ABCF1-206ENST00000479542 STX8Q9UNK0 236 aa15.74■□□□□ 0.11
ABCF1-206ENST00000479542 GRIN2DO15399 1336 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 PFKMP08237 780 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 SUPT20HL2P0C7V6 817 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 ALAS1P13196 640 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 SMPD1P17405 629 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 IKQ13123 557 aaPredicted RBP15.73■□□□□ 0.11
ABCF1-206ENST00000479542 DUSP28Q4G0W2 176 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 CXCL17Q6UXB2 119 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 TTC14Q96N46 770 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
ABCF1-206ENST00000479542 DYNC1LI2O43237 492 aaPredicted RBP15.72■□□□□ 0.11
ABCF1-206ENST00000479542 PCP11498 1178 aaKnown RBP15.72■□□□□ 0.11
ABCF1-206ENST00000479542 MX1P20591 662 aa15.72■□□□□ 0.11
ABCF1-206ENST00000479542 BEX3Q00994 111 aa15.72■□□□□ 0.11
ABCF1-206ENST00000479542 KCTD1Q719H9 257 aa15.72■□□□□ 0.11
ABCF1-206ENST00000479542 NOL8Q76FK4 1167 aaKnown RBP15.72■□□□□ 0.11
ABCF1-206ENST00000479542 EVI5LQ96CN4 794 aa15.72■□□□□ 0.11
ABCF1-206ENST00000479542 NOC4LQ9BVI4 516 aaKnown RBP15.72■□□□□ 0.11
ABCF1-206ENST00000479542 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
ABCF1-206ENST00000479542 MSRAQ9UJ68 235 aa15.72■□□□□ 0.11
ABCF1-206ENST00000479542 PCDHB15Q9Y5E8 787 aa15.72■□□□□ 0.11
ABCF1-206ENST00000479542 ZMYM6O95789 1325 aa15.71■□□□□ 0.11
ABCF1-206ENST00000479542 NKRFO15226 690 aaKnown RBP eCLIP15.71■□□□□ 0.11
ABCF1-206ENST00000479542 TOP1P11387 765 aaKnown RBP15.71■□□□□ 0.11
ABCF1-206ENST00000479542 CYP2C18P33260 490 aa15.71■□□□□ 0.11
ABCF1-206ENST00000479542 MUM1L1Q5H9M0 696 aa15.71■□□□□ 0.11
ABCF1-206ENST00000479542 PPP1R12CQ9BZL4 782 aa15.71■□□□□ 0.11
ABCF1-206ENST00000479542 CCPG1Q9ULG6 757 aa15.71■□□□□ 0.11
ABCF1-206ENST00000479542 KPNA6O60684 536 aa15.7■□□□□ 0.1
ABCF1-206ENST00000479542 PBX2P40425 430 aa15.7■□□□□ 0.1
ABCF1-206ENST00000479542 KIAA1211Q6ZU35 1233 aa15.7■□□□□ 0.1
ABCF1-206ENST00000479542 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
ABCF1-206ENST00000479542 RGS22Q8NE09 1264 aa15.7■□□□□ 0.1
ABCF1-206ENST00000479542 DNERQ8NFT8 737 aa15.7■□□□□ 0.1
ABCF1-206ENST00000479542 ALDH8A1Q9H2A2 487 aaPredicted RBP15.7■□□□□ 0.1
ABCF1-206ENST00000479542 PDGFCQ9NRA1 345 aa15.7■□□□□ 0.1
ABCF1-206ENST00000479542 MYO9BQ13459 2157 aa15.7■□□□□ 0.1
ABCF1-206ENST00000479542 GRXCR1A8MXD5 290 aa15.69■□□□□ 0.1
ABCF1-206ENST00000479542 B4GALT4O60513 344 aa15.69■□□□□ 0.1
ABCF1-206ENST00000479542 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
ABCF1-206ENST00000479542 ACRP10323 421 aa15.69■□□□□ 0.1
ABCF1-206ENST00000479542 POU3F3P20264 500 aaPredicted RBP15.69■□□□□ 0.1
ABCF1-206ENST00000479542 CPT1AP50416 773 aa15.69■□□□□ 0.1
ABCF1-206ENST00000479542 ALDH5A1P51649 535 aaPredicted RBP15.69■□□□□ 0.1
ABCF1-206ENST00000479542 MPHOSPH6Q99547 160 aaKnown RBP15.69■□□□□ 0.1
ABCF1-206ENST00000479542 SLC28A3Q9HAS3 691 aa15.69■□□□□ 0.1
ABCF1-206ENST00000479542 CXXC1Q9P0U4 656 aaPredicted RBP15.69■□□□□ 0.1
ABCF1-206ENST00000479542 PCDHA11Q9Y5I1 949 aa15.69■□□□□ 0.1
ABCF1-206ENST00000479542 WDR19Q8NEZ3 1342 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 LRRC37A2A6NM11 1700 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 TNFRSF10AO00220 468 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 NMT2O60551 498 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 FGAP02671 866 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 SNHG28P0DPA3 235 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms