RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 AFF3P51826 1226 aaKnown RBP5.17□□□□□ -1.58
NF1-209ENST00000479536 SSRP1Q08945 709 aaKnown RBP5.17□□□□□ -1.58
NF1-209ENST00000479536 NCAPHQ15003 741 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 VHLLQ6RSH7 139 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 KIAA0907Q7Z7F0 614 aaPredicted RBP5.17□□□□□ -1.58
NF1-209ENST00000479536 SPPL2CQ8IUH8 684 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 JMYQ8N9B5 988 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 ZCRB1Q8TBF4 217 aaKnown RBP5.17□□□□□ -1.58
NF1-209ENST00000479536 ZNF669Q96BR6 464 aaPredicted RBP5.17□□□□□ -1.58
NF1-209ENST00000479536 ACSF2Q96CM8 615 aaPredicted RBP5.17□□□□□ -1.58
NF1-209ENST00000479536 SIGLEC10Q96LC7 697 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 SLC9A7Q96T83 725 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 PHAXQ9H814 394 aaKnown RBP5.17□□□□□ -1.58
NF1-209ENST00000479536 GPATCH2Q9NW75 528 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 IFT57Q9NWB7 429 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 PCDHB10Q9UN67 800 aa5.17□□□□□ -1.58
NF1-209ENST00000479536 FAM86C2PA6NEL3 165 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 PPP1R12AO14974 1030 aaPredicted RBP5.16□□□□□ -1.58
NF1-209ENST00000479536 DNAJC6O75061 913 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 RAG1P15918 1043 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 IGBP1P78318 339 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 VMACQ2NL98 169 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 ZXDCQ2QGD7 858 aaPredicted RBP5.16□□□□□ -1.58
NF1-209ENST00000479536 C16orf86Q6ZW13 317 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 EEPD1Q7L9B9 569 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 PPP1R13LQ8WUF5 828 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 DACT3Q96B18 629 aaPredicted RBP5.16□□□□□ -1.58
NF1-209ENST00000479536 BRINP2Q9C0B6 783 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 SPC25Q9HBM1 224 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 PRKAB1Q9Y478 270 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 PCDHA11Q9Y5I1 949 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 PTCH2Q9Y6C5 1203 aa5.16□□□□□ -1.58
NF1-209ENST00000479536 PSPNO60542 156 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 SRSF3P84103 164 aaKnown RBP5.15□□□□□ -1.59
NF1-209ENST00000479536 CHRNEQ04844 493 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 SNX17Q15036 470 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 ADGRF1Q5T601 910 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 KIAA1211LQ6NV74 962 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 TSPYL5Q86VY4 417 aaPredicted RBP5.15□□□□□ -1.59
NF1-209ENST00000479536 MCATQ8IVS2 390 aaKnown RBP5.15□□□□□ -1.59
NF1-209ENST00000479536 SIRT2Q8IXJ6 389 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 FAM13CQ8NE31 585 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 KLHL6Q8WZ60 621 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 FEZ1Q99689 392 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 ADAM7Q9H2U9 754 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 TJP2Q9UDY2 1190 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 MBD1Q9UIS9 605 aaPredicted RBP5.15□□□□□ -1.59
NF1-209ENST00000479536 NOP58Q9Y2X3 529 aaKnown RBP5.15□□□□□ -1.59
NF1-209ENST00000479536 COL4A3BPQ9Y5P4 624 aa5.15□□□□□ -1.59
NF1-209ENST00000479536 OR14I1A6ND48 311 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 SUSD5O60279 629 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 POLR2BP30876 1174 aaKnown RBP5.14□□□□□ -1.59
NF1-209ENST00000479536 YARSP54577 528 aaKnown RBP5.14□□□□□ -1.59
NF1-209ENST00000479536 GYS2P54840 703 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 ANAPC15P60006 121 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 SLC7A5Q01650 507 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 TKFCQ3LXA3 575 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 GNPTABQ3T906 1256 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 TAF7LQ5H9L4 462 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 SLFN12Q8IYM2 578 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 SYT8Q8NBV8 401 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 TMEM87BQ96K49 555 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 SPATA9Q9BWV2 254 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 GPR62Q9BZJ7 368 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 EPN3Q9H201 632 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 TMX1Q9H3N1 280 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 PCDH12Q9NPG4 1184 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 SIRT5Q9NXA8 310 aa5.14□□□□□ -1.59
NF1-209ENST00000479536 ZNF214Q9UL59 606 aaPredicted RBP5.14□□□□□ -1.59
NF1-209ENST00000479536 FAM153BP0C7A2 387 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 INSRRP14616 1297 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 CCNFP41002 786 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 EPHB3P54753 998 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 PUM1Q14671 1186 aaKnown RBP eCLIP5.13□□□□□ -1.59
NF1-209ENST00000479536 TCEA2Q15560 299 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 SLC10A6Q3KNW5 377 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 SPATS1Q496A3 300 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 SLC6A19Q695T7 634 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 MRPL41Q8IXM3 137 aaKnown RBP5.13□□□□□ -1.59
NF1-209ENST00000479536 SP8Q8IXZ3 490 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 SYNPOQ8N3V7 929 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 ANKS4BQ8N8V4 417 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 ZSWIM2Q8NEG5 633 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 SHISA4Q96DD7 197 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 DHRS1Q96LJ7 313 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 TEPSINQ96N21 525 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 EBF1Q9UH73 591 aa5.13□□□□□ -1.59
NF1-209ENST00000479536 IQCA1LA6NCM1 817 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 RGS13O14921 159 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 ADCY3O60266 1144 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 RAB11FIP3O75154 756 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 ASMTLO95671 621 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 PMS1P54277 932 aaKnown RBP5.12□□□□□ -1.59
NF1-209ENST00000479536 PLP2Q04941 152 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 DUSP4Q13115 394 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 BBS9Q3SYG4 887 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 PHACTR4Q8IZ21 702 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 LRRC47Q8N1G4 583 aaKnown RBP5.12□□□□□ -1.59
NF1-209ENST00000479536 DNAJB8Q8NHS0 232 aa5.12□□□□□ -1.59
NF1-209ENST00000479536 SLC6A18Q96N87 628 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms