RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 HOXC6P09630 235 aa29■■■□□ 2.23
PERM1-203ENST00000479361 GRK4P32298 578 aa29■■■□□ 2.23
PERM1-203ENST00000479361 SLC35G1Q2M3R5 365 aa29■■■□□ 2.23
PERM1-203ENST00000479361 USH1GQ495M9 461 aa29■■■□□ 2.23
PERM1-203ENST00000479361 ZNF274Q96GC6 653 aaPredicted RBP29■■■□□ 2.23
PERM1-203ENST00000479361 PIGSQ96S52 555 aa29■■■□□ 2.23
PERM1-203ENST00000479361 SEC63Q9UGP8 760 aaKnown RBP29■■■□□ 2.23
PERM1-203ENST00000479361 NID2Q14112 1375 aa29■■■□□ 2.23
PERM1-203ENST00000479361 ABCB11O95342 1321 aa28.99■■■□□ 2.23
PERM1-203ENST00000479361 PDIA3P30101 505 aaKnown RBP28.99■■■□□ 2.23
PERM1-203ENST00000479361 PFASO15067 1338 aa28.98■■■□□ 2.23
PERM1-203ENST00000479361 MUM1L1Q5H9M0 696 aa28.98■■■□□ 2.23
PERM1-203ENST00000479361 CMTR1Q8N1G2 835 aaKnown RBP28.98■■■□□ 2.23
PERM1-203ENST00000479361 AK2P54819 239 aa28.97■■■□□ 2.23
PERM1-203ENST00000479361 CCDC82Q8N4S0 544 aa28.97■■■□□ 2.23
PERM1-203ENST00000479361 FAM217BQ9NTX9 383 aaPredicted RBP28.97■■■□□ 2.23
PERM1-203ENST00000479361 MRPL11Q9Y3B7 192 aaKnown RBP28.97■■■□□ 2.23
PERM1-203ENST00000479361 HTTP42858 3142 aa28.97■■■□□ 2.23
PERM1-203ENST00000479361 COBLO75128 1261 aa28.96■■■□□ 2.23
PERM1-203ENST00000479361 ELNP15502 786 aa28.96■■■□□ 2.23
PERM1-203ENST00000479361 TAL1P17542 331 aaPredicted RBP28.96■■■□□ 2.23
PERM1-203ENST00000479361 CDC27P30260 824 aa28.96■■■□□ 2.23
PERM1-203ENST00000479361 PIBF1Q8WXW3 757 aa28.96■■■□□ 2.23
PERM1-203ENST00000479361 TBC1D32Q96NH3 1257 aa28.96■■■□□ 2.23
PERM1-203ENST00000479361 KIF2CQ99661 725 aa28.96■■■□□ 2.23
PERM1-203ENST00000479361 MAF1Q9H063 256 aa28.96■■■□□ 2.23
PERM1-203ENST00000479361 A1CFQ9NQ94 594 aaKnown RBP28.96■■■□□ 2.23
PERM1-203ENST00000479361 BIN2Q9UBW5 565 aaPredicted RBP28.96■■■□□ 2.23
PERM1-203ENST00000479361 DIS3Q9Y2L1 958 aaKnown RBP28.96■■■□□ 2.23
PERM1-203ENST00000479361 PCDHA1Q9Y5I3 950 aa28.96■■■□□ 2.23
PERM1-203ENST00000479361 PGK2P07205 417 aa28.95■■■□□ 2.22
PERM1-203ENST00000479361 ADD1P35611 737 aaKnown RBP28.95■■■□□ 2.22
PERM1-203ENST00000479361 NSMFQ6X4W1 530 aa28.95■■■□□ 2.22
PERM1-203ENST00000479361 IL27Q8NEV9 243 aa28.95■■■□□ 2.22
PERM1-203ENST00000479361 SH3TC2Q8TF17 1288 aa28.95■■■□□ 2.22
PERM1-203ENST00000479361 CLEC4DQ8WXI8 215 aa28.95■■■□□ 2.22
PERM1-203ENST00000479361 ARMC5Q96C12 935 aa28.95■■■□□ 2.22
PERM1-203ENST00000479361 LARP6Q9BRS8 491 aaKnown RBP28.95■■■□□ 2.22
PERM1-203ENST00000479361 DNAJC25-GNG10A0A024R161 153 aa28.94■■■□□ 2.22
PERM1-203ENST00000479361 NFIBO00712 420 aa28.94■■■□□ 2.22
PERM1-203ENST00000479361 PPP1R11O60927 126 aaPredicted RBP28.94■■■□□ 2.22
PERM1-203ENST00000479361 HMGCRP04035 888 aa28.94■■■□□ 2.22
PERM1-203ENST00000479361 RABEP1Q15276 862 aa28.94■■■□□ 2.22
PERM1-203ENST00000479361 NPLOC4Q8TAT6 608 aa28.94■■■□□ 2.22
PERM1-203ENST00000479361 ABHD8Q96I13 439 aa28.94■■■□□ 2.22
PERM1-203ENST00000479361 CNTNAP5Q8WYK1 1306 aa28.94■■■□□ 2.22
PERM1-203ENST00000479361 POTEB2H3BUK9 544 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 UBXN2AP68543 259 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 CCT2P78371 535 aaKnown RBP28.93■■■□□ 2.22
PERM1-203ENST00000479361 FUT2Q10981 343 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 ZNF792Q3KQV3 632 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 OLFML2BQ68BL8 750 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 MCF2L2Q86YR7 1114 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 RGS22Q8NE09 1264 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 TRIB2Q92519 343 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 CYP39A1Q9NYL5 469 aa28.93■■■□□ 2.22
PERM1-203ENST00000479361 CCL14Q16627 93 aa28.92■■■□□ 2.22
PERM1-203ENST00000479361 MAML3Q96JK9 1138 aa28.92■■■□□ 2.22
PERM1-203ENST00000479361 SLKQ9H2G2 1235 aaPredicted RBP28.92■■■□□ 2.22
PERM1-203ENST00000479361 TPCN1Q9ULQ1 816 aa28.92■■■□□ 2.22
PERM1-203ENST00000479361 BAZ2BQ9UIF8 2168 aaKnown RBP28.92■■■□□ 2.22
PERM1-203ENST00000479361 MYH6P13533 1939 aa28.91■■■□□ 2.22
PERM1-203ENST00000479361 PTPDC1A2A3K4 754 aa28.91■■■□□ 2.22
PERM1-203ENST00000479361 INHAP05111 366 aa28.91■■■□□ 2.22
PERM1-203ENST00000479361 STK3Q13188 491 aa28.91■■■□□ 2.22
PERM1-203ENST00000479361 MFSD14CQ5VZR4 134 aa28.91■■■□□ 2.22
PERM1-203ENST00000479361 CPLX2Q6PUV4 134 aaKnown RBP28.91■■■□□ 2.22
PERM1-203ENST00000479361 RNF207Q6ZRF8 634 aa28.91■■■□□ 2.22
PERM1-203ENST00000479361 ZNF333Q96JL9 665 aa28.91■■■□□ 2.22
PERM1-203ENST00000479361 RBM27Q9P2N5 1060 aaKnown RBP28.91■■■□□ 2.22
PERM1-203ENST00000479361 CPLX1O14810 134 aa28.9■■■□□ 2.22
PERM1-203ENST00000479361 BAATQ14032 418 aaPredicted RBP28.9■■■□□ 2.22
PERM1-203ENST00000479361 ZNF467Q7Z7K2 595 aaPredicted RBP28.9■■■□□ 2.22
PERM1-203ENST00000479361 NCOA5Q9HCD5 579 aaKnown RBP28.9■■■□□ 2.22
PERM1-203ENST00000479361 V9GY48 417 aaPredicted RBP28.9■■■□□ 2.22
PERM1-203ENST00000479361 MSL3Q8N5Y2 521 aaKnown RBP28.89■■■□□ 2.22
PERM1-203ENST00000479361 FAM133AQ8N9E0 248 aa28.89■■■□□ 2.22
PERM1-203ENST00000479361 FLRT1Q9NZU1 646 aa28.89■■■□□ 2.22
PERM1-203ENST00000479361 ZNFX1Q9P2E3 1918 aaKnown RBP28.88■■■□□ 2.21
PERM1-203ENST00000479361 SMCHD1A6NHR9 2005 aa28.88■■■□□ 2.21
PERM1-203ENST00000479361 hCG_1642624A0A1W2PR95 340 aa28.88■■■□□ 2.21
PERM1-203ENST00000479361 PFKFB2O60825 505 aa28.88■■■□□ 2.21
PERM1-203ENST00000479361 IFNAR1P17181 557 aa28.88■■■□□ 2.21
PERM1-203ENST00000479361 RPS6P62753 249 aaKnown RBP28.88■■■□□ 2.21
PERM1-203ENST00000479361 AKAP17AQ02040 695 aaKnown RBP28.88■■■□□ 2.21
PERM1-203ENST00000479361 NOL8Q76FK4 1167 aaKnown RBP28.88■■■□□ 2.21
PERM1-203ENST00000479361 SAMD3Q8N6K7 520 aa28.88■■■□□ 2.21
PERM1-203ENST00000479361 ST18O60284 1047 aa28.87■■■□□ 2.21
PERM1-203ENST00000479361 CALML3P27482 149 aa28.87■■■□□ 2.21
PERM1-203ENST00000479361 CNTN2Q02246 1040 aa28.87■■■□□ 2.21
PERM1-203ENST00000479361 NTRK3Q16288 839 aa28.87■■■□□ 2.21
PERM1-203ENST00000479361 HEATR3Q7Z4Q2 680 aa28.87■■■□□ 2.21
PERM1-203ENST00000479361 MAP3K20Q9NYL2 800 aaKnown RBP28.87■■■□□ 2.21
PERM1-203ENST00000479361 ADD3Q9UEY8 706 aaKnown RBP28.87■■■□□ 2.21
PERM1-203ENST00000479361 LIMCH1Q9UPQ0 1083 aa28.87■■■□□ 2.21
PERM1-203ENST00000479361 hCG_1984214I3L0E3 225 aa28.86■■■□□ 2.21
PERM1-203ENST00000479361 CDKL5O76039 1030 aa28.86■■■□□ 2.21
PERM1-203ENST00000479361 SLC30A10Q6XR72 485 aa28.86■■■□□ 2.21
PERM1-203ENST00000479361 TRIM22Q8IYM9 498 aa28.86■■■□□ 2.21
PERM1-203ENST00000479361 ZNF713Q8N859 430 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms