RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 RASA1P20936 1047 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 TMED1Q13445 227 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 ISM2Q6H9L7 571 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 ZNF280DQ6N043 979 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 CCDC34Q96HJ3 373 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 DHX36Q9H2U1 1008 aaKnown RBP12.33□□□□□ -0.44
GSDMB-209ENST00000479136 ORC3Q9UBD5 711 aaPredicted RBP12.33□□□□□ -0.44
GSDMB-209ENST00000479136 STX8Q9UNK0 236 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 ATP6V1DQ9Y5K8 247 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 BRCA1P38398 1863 aaKnown RBP12.33□□□□□ -0.44
GSDMB-209ENST00000479136 EME2A4GXA9 379 aaPredicted RBP12.33□□□□□ -0.44
GSDMB-209ENST00000479136 CALM1P0DP23 149 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 CALM2P0DP24 149 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 CALM3P0DP25 149 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 CDC27P30260 824 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 ERCC6LQ2NKX8 1250 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 ARHGAP29Q52LW3 1261 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
GSDMB-209ENST00000479136 CDCA2Q69YH5 1023 aaPredicted RBP12.33□□□□□ -0.44
GSDMB-209ENST00000479136 SPATA21Q7Z572 469 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 ZFPM1Q8IX07 1006 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 IRX2Q9BZI1 471 aaPredicted RBP12.33□□□□□ -0.44
GSDMB-209ENST00000479136 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
GSDMB-209ENST00000479136 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 SWAP70Q9UH65 585 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 MTMR6Q9Y217 621 aa12.33□□□□□ -0.44
GSDMB-209ENST00000479136 F13A1P00488 732 aa12.32□□□□□ -0.44
GSDMB-209ENST00000479136 PTGS1P23219 599 aa12.32□□□□□ -0.44
GSDMB-209ENST00000479136 SSRP1Q08945 709 aaKnown RBP12.32□□□□□ -0.44
GSDMB-209ENST00000479136 NME8Q8N427 588 aa12.32□□□□□ -0.44
GSDMB-209ENST00000479136 FANCBQ8NB91 859 aa12.32□□□□□ -0.44
GSDMB-209ENST00000479136 ZKSCAN4Q969J2 545 aaPredicted RBP12.32□□□□□ -0.44
GSDMB-209ENST00000479136 SYT17Q9BSW7 474 aa12.32□□□□□ -0.44
GSDMB-209ENST00000479136 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
GSDMB-209ENST00000479136 MYO6Q9UM54 1294 aa12.32□□□□□ -0.44
GSDMB-209ENST00000479136 FER1L6Q2WGJ9 1857 aa12.32□□□□□ -0.44
GSDMB-209ENST00000479136 RPS12P25398 132 aaKnown RBP12.31□□□□□ -0.44
GSDMB-209ENST00000479136 CDC37L1Q7L3B6 337 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 DGKHQ86XP1 1220 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 MAB21L3Q8N8X9 362 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 C3orf20Q8ND61 904 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 PHKBQ93100 1093 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 MYOZ2Q9NPC6 264 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 PI4KBQ9UBF8 816 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 ZNF70Q9UC06 446 aaPredicted RBP12.31□□□□□ -0.44
GSDMB-209ENST00000479136 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 ATXN2Q99700 1313 aaKnown RBP12.31□□□□□ -0.44
GSDMB-209ENST00000479136 DDTLA6NHG4 134 aaPredicted RBP12.31□□□□□ -0.44
GSDMB-209ENST00000479136 ENTPD3O75355 529 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 DDAH1O94760 285 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 NAT1P18440 290 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 PEX19P40855 299 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 RCAN1P53805 252 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 FERMT3Q86UX7 667 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 TRIM22Q8IYM9 498 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 ACBD3Q9H3P7 528 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 IL17RBQ9NRM6 502 aa12.31□□□□□ -0.44
GSDMB-209ENST00000479136 UTP6Q9NYH9 597 aaKnown RBP12.31□□□□□ -0.44
GSDMB-209ENST00000479136 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
GSDMB-209ENST00000479136 FZD9O00144 591 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 LMNB1P20700 586 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
GSDMB-209ENST00000479136 AKAP17AQ02040 695 aaKnown RBP12.3□□□□□ -0.44
GSDMB-209ENST00000479136 GUCY1B3Q02153 619 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 MFSD4BQ5TF39 518 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 TRIM42Q8IWZ5 723 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 NEDD1Q8NHV4 660 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 MAGEC3Q8TD91 643 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 C8orf76Q96K31 380 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 TRIM7Q9C029 511 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 TCP11L1Q9NUJ3 509 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
GSDMB-209ENST00000479136 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
GSDMB-209ENST00000479136 PRELPP51888 382 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 GABPAQ06546 454 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 IQCB1Q15051 598 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 PPP2R5BQ15173 497 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 ACBD5Q5T8D3 534 aaPredicted RBP12.3□□□□□ -0.44
GSDMB-209ENST00000479136 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 CMTR1Q8N1G2 835 aaKnown RBP12.3□□□□□ -0.44
GSDMB-209ENST00000479136 PNMA1Q8ND90 353 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 PARD3BQ8TEW8 1205 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 UBXN4Q92575 508 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 EZH1Q92800 747 aaPredicted RBP12.3□□□□□ -0.44
GSDMB-209ENST00000479136 CSRNP1Q96S65 589 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 EHD4Q9H223 541 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
GSDMB-209ENST00000479136 MYH1P12882 1939 aa12.3□□□□□ -0.44
GSDMB-209ENST00000479136 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
GSDMB-209ENST00000479136 SHTN1A0MZ66 631 aa12.29□□□□□ -0.44
GSDMB-209ENST00000479136 FAM196BA6NMK8 535 aa12.29□□□□□ -0.44
GSDMB-209ENST00000479136 FDPSP14324 419 aaKnown RBP12.29□□□□□ -0.44
GSDMB-209ENST00000479136 AKR1B1P15121 316 aa12.29□□□□□ -0.44
GSDMB-209ENST00000479136 TRIM29Q14134 588 aa12.29□□□□□ -0.44
GSDMB-209ENST00000479136 DBN1Q16643 649 aa12.29□□□□□ -0.44
GSDMB-209ENST00000479136 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
GSDMB-209ENST00000479136 CC2D1AQ6P1N0 951 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms