RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-211	ENST00000479092	GJD2	Q9UKL4	321 aa		13.77	□□□□□ -0.21
PTPN7-211	ENST00000479092	HPS5	Q9UPZ3	1129 aa		13.77	□□□□□ -0.21
PTPN7-211	ENST00000479092	PLXNB2	O15031	1838 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	CNTNAP5	Q8WYK1	1306 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	PNMA6F	A0A0J9YX94	578 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	CPLX1	O14810	134 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	CYTH3	O43739	400 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	HMGCR	P04035	888 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	ELN	P15502	786 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	AK2	P54819	239 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	EVC	P57679	992 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	RABEP1	Q15276	862 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	CPLX2	Q6PUV4	134 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	NSMF	Q6X4W1	530 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	NOL8	Q76FK4	1167 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	CMTR1	Q8N1G2	835 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	CCDC82	Q8N4S0	544 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	SRBD1	Q8N5C6	995 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	USP6NL	Q92738	828 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	MTMR8	Q96EF0	704 aa		13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	ZNF274	Q96GC6	653 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	MRPL11	Q9Y3B7	192 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-211	ENST00000479092	PTPDC1	A2A3K4	754 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	POTEB2	H3BUK9	544 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	NFIB	O00712	420 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	ST18	O60284	1047 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	PGK2	P07205	417 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	HOXC6	P09630	235 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	PDIA3	P30101	505 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	UBXN2A	P68543	259 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	STK3	Q13188	491 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	SLC35G1	Q2M3R5	365 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	MUM1L1	Q5H9M0	696 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	MCF2L2	Q86YR7	1114 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	SH3TC2	Q8TF17	1288 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	LARP6	Q9BRS8	491 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	SLK	Q9H2G2	1235 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	A1CF	Q9NQ94	594 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	RBM27	Q9P2N5	1060 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	PCDHA1	Q9Y5I3	950 aa		13.75	□□□□□ -0.21
PTPN7-211	ENST00000479092	INHA	P05111	366 aa		13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	CDC27	P30260	824 aa		13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	ADD1	P35611	737 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	CCT2	P78371	535 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	AKAP17A	Q02040	695 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	MFSD14C	Q5VZR4	134 aa		13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	RNF207	Q6ZRF8	634 aa		13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	HEATR3	Q7Z4Q2	680 aa		13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	TRIB2	Q92519	343 aa		13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	ARMC5	Q96C12	935 aa		13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	NCOA5	Q9HCD5	579 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	CENPF	P49454	3210 aa		13.74	□□□□□ -0.21
PTPN7-211	ENST00000479092	PPP1R11	O60927	126 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	COBL	O75128	1261 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	CDKL5	O76039	1030 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	CALML3	P27482	149 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	CCL14	Q16627	93 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	TRIM22	Q8IYM9	498 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	IL27	Q8NEV9	243 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	NPLOC4	Q8TAT6	608 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	CLEC4D	Q8WXI8	215 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	ABHD8	Q96I13	439 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	MAML3	Q96JK9	1138 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	KIF2C	Q99661	725 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	CYP39A1	Q9NYL5	469 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	TPCN1	Q9ULQ1	816 aa		13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	DIS3	Q9Y2L1	958 aa	Known RBP	13.73	□□□□□ -0.21
PTPN7-211	ENST00000479092	DNAJC25-GNG10	A0A024R161	153 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	hCG_1642624	A0A1W2PR95	340 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	hCG_1984214	I3L0E3	225 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	RPS6	P62753	249 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	BAAT	Q14032	418 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	ZNF792	Q3KQV3	632 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	OLFML2B	Q68BL8	750 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	SLC30A10	Q6XR72	485 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	ZNF713	Q8N859	430 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	RGS22	Q8NE09	1264 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	ZNF333	Q96JL9	665 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	MPHOSPH6	Q99547	160 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	SLC26A6	Q9BXS9	759 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	MAF1	Q9H063	256 aa		13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	ADD3	Q9UEY8	706 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-211	ENST00000479092	PFKFB2	O60825	505 aa		13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	CFB	P00751	764 aa		13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	MYC	P01106	439 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	PRKAR2A	P13861	404 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	IFNAR1	P17181	557 aa		13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	FUT2	Q10981	343 aa		13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	PPP1R18	Q6NYC8	613 aa		13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	MSL3	Q8N5Y2	521 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	FAM133A	Q8N9E0	248 aa		13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	PHKB	Q93100	1093 aa		13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	RNF26	Q9BY78	433 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092		V9GY48	417 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-211	ENST00000479092	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms