RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 PFASO15067 1338 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 CNTNAP5Q8WYK1 1306 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 MGAMO43451 1857 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 PNMA6FA0A0J9YX94 578 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 ADCY3O60266 1144 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 ST18O60284 1047 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
SRRT-211ENST00000478693 CDC27P30260 824 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 GRK4P32298 578 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 MORN1Q5T089 497 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 ABRAQ8N0Z2 381 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 ZNF274Q96GC6 653 aaPredicted RBP13.17□□□□□ -0.3
SRRT-211ENST00000478693 NCOA5Q9HCD5 579 aaKnown RBP13.17□□□□□ -0.3
SRRT-211ENST00000478693 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
SRRT-211ENST00000478693 PCDHA1Q9Y5I3 950 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 NID2Q14112 1375 aa13.17□□□□□ -0.3
SRRT-211ENST00000478693 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 NFIBO00712 420 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 PGK2P07205 417 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 ELNP15502 786 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
SRRT-211ENST00000478693 UBXN2AP68543 259 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 IRF5Q13568 498 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 TRMT44Q8IYL2 757 aaKnown RBP13.16□□□□□ -0.3
SRRT-211ENST00000478693 SH3TC2Q8TF17 1288 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 MTMR8Q96EF0 704 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 ALDH8A1Q9H2A2 487 aaPredicted RBP13.16□□□□□ -0.3
SRRT-211ENST00000478693 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
SRRT-211ENST00000478693 GJD2Q9UKL4 321 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 TPCN1Q9ULQ1 816 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
SRRT-211ENST00000478693 CDKL5O76039 1030 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
SRRT-211ENST00000478693 CALML3P27482 149 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 EVCP57679 992 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 MCF2L2Q86YR7 1114 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 NPLOC4Q8TAT6 608 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 KIF2CQ99661 725 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 SLC26A6Q9BXS9 759 aa13.15□□□□□ -0.3
SRRT-211ENST00000478693 PPP1R11O60927 126 aaPredicted RBP13.14□□□□□ -0.31
SRRT-211ENST00000478693 COBLO75128 1261 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 PPFIA3O75145 1194 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 CFBP00751 764 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 HMGCRP04035 888 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 INHAP05111 366 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 XRCC5P13010 732 aaKnown RBP13.14□□□□□ -0.31
SRRT-211ENST00000478693 CCL14Q16627 93 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 MFSD14CQ5VZR4 134 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 TRIB2Q92519 343 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 USP6NLQ92738 828 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
SRRT-211ENST00000478693 PHKBQ93100 1093 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 FAM217BQ9NTX9 383 aaPredicted RBP13.14□□□□□ -0.31
SRRT-211ENST00000478693 CYP39A1Q9NYL5 469 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
SRRT-211ENST00000478693 LIMCH1Q9UPQ0 1083 aa13.14□□□□□ -0.31
SRRT-211ENST00000478693 PFKFB2O60825 505 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 LARGE1O95461 756 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 HOXC6P09630 235 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 NAPAP54920 295 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
SRRT-211ENST00000478693 SCRN1Q12765 414 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
SRRT-211ENST00000478693 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRRT-211ENST00000478693 NECAB1Q8N987 351 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 CUL5Q93034 780 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 MAML3Q96JK9 1138 aa13.13□□□□□ -0.31
SRRT-211ENST00000478693 MPHOSPH6Q99547 160 aaKnown RBP13.13□□□□□ -0.31
SRRT-211ENST00000478693 RNF26Q9BY78 433 aaPredicted RBP13.13□□□□□ -0.31
SRRT-211ENST00000478693 V9GY48 417 aaPredicted RBP13.13□□□□□ -0.31
SRRT-211ENST00000478693 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
SRRT-211ENST00000478693 hCG_1984214I3L0E3 225 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 IFNAR1P17181 557 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
SRRT-211ENST00000478693 ME3Q16798 604 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 ZNF792Q3KQV3 632 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 ZNF713Q8N859 430 aaPredicted RBP13.12□□□□□ -0.31
SRRT-211ENST00000478693 GTF3C6Q969F1 213 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 ABHD8Q96I13 439 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 ZSCAN31Q96LW9 406 aaPredicted RBP13.12□□□□□ -0.31
SRRT-211ENST00000478693 FLRT1Q9NZU1 646 aa13.12□□□□□ -0.31
SRRT-211ENST00000478693 ADD3Q9UEY8 706 aaKnown RBP13.12□□□□□ -0.31
SRRT-211ENST00000478693 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
SRRT-211ENST00000478693 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms