RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 CLIP2Q9UDT6 1046 aa14.5□□□□□ -0.09
AGRN-207ENST00000478677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.5□□□□□ -0.09
AGRN-207ENST00000478677 MTCH2Q9Y6C9 303 aa14.5□□□□□ -0.09
AGRN-207ENST00000478677 TRIOO75962 3097 aa14.5□□□□□ -0.09
AGRN-207ENST00000478677 IFIT2P09913 472 aaKnown RBP14.49□□□□□ -0.09
AGRN-207ENST00000478677 SNAP25P60880 206 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 MRPS5P82675 430 aaKnown RBP14.49□□□□□ -0.09
AGRN-207ENST00000478677 ITGA7Q13683 1181 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 C20orf194Q5TEA3 1177 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 GIMAP6Q6P9H5 292 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 TMEM199Q8N511 208 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 PCSK9Q8NBP7 692 aaKnown RBP14.49□□□□□ -0.09
AGRN-207ENST00000478677 CHST13Q8NET6 341 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 DDX11Q96FC9 970 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
AGRN-207ENST00000478677 HIPK3Q9H422 1215 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 INCENPQ9NQS7 918 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 COG6Q9Y2V7 657 aa14.49□□□□□ -0.09
AGRN-207ENST00000478677 RAB30Q15771 203 aa14.48□□□□□ -0.09
AGRN-207ENST00000478677 HSP90AB4PQ58FF6 505 aa14.48□□□□□ -0.09
AGRN-207ENST00000478677 TLK2Q86UE8 772 aa14.48□□□□□ -0.09
AGRN-207ENST00000478677 FBXO16Q8IX29 292 aaPredicted RBP14.48□□□□□ -0.09
AGRN-207ENST00000478677 KBTBD3Q8NAB2 608 aa14.48□□□□□ -0.09
AGRN-207ENST00000478677 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
AGRN-207ENST00000478677 EPHX3Q9H6B9 360 aa14.48□□□□□ -0.09
AGRN-207ENST00000478677 TRMT13Q9NUP7 481 aaKnown RBP14.48□□□□□ -0.09
AGRN-207ENST00000478677 SYNPO2Q9UMS6 1093 aa14.48□□□□□ -0.09
AGRN-207ENST00000478677 TLL1O43897 1013 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 RAB11FIP3O75154 756 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 FGBP02675 491 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 TNFAIP2Q03169 654 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 FSCN1Q16658 493 aaKnown RBP14.47□□□□□ -0.09
AGRN-207ENST00000478677 CCDC129Q6ZRS4 1044 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 NEDD1Q8NHV4 660 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 GAS2L1Q99501 681 aaPredicted RBP14.47□□□□□ -0.09
AGRN-207ENST00000478677 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 RNF146Q9NTX7 359 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 CYP39A1Q9NYL5 469 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 FEM1BQ9UK73 627 aa14.47□□□□□ -0.09
AGRN-207ENST00000478677 C5orf42Q9H799 3197 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 RBM47A0AV96 593 aaKnown RBP14.46□□□□□ -0.09
AGRN-207ENST00000478677 ERC2O15083 957 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 GPAA1O43292 621 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 NMT2O60551 498 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 CYP2C9P11712 490 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 ANKRD35Q8N283 1001 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 APPBP2Q92624 585 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 GMCL1Q96IK5 515 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 PCDHA11Q9Y5I1 949 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 MUC6Q6W4X9 2439 aa14.46□□□□□ -0.09
AGRN-207ENST00000478677 PIEZO1Q92508 2521 aa14.46□□□□□ -0.1
AGRN-207ENST00000478677 USP34Q70CQ2 3546 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 MINDY4BA8MYZ0 360 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 TMEM232C9JQI7 657 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 RAD21O60216 631 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 PLA2G6O60733 806 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 CA3P07451 260 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 DMDP11532 3685 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 BMP3P12645 472 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 IGFBP4P22692 258 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 SLC4A3P48751 1232 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 PURAQ00577 322 aaKnown RBP14.45□□□□□ -0.1
AGRN-207ENST00000478677 TAP1Q03518 808 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 SLFN13Q68D06 897 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 IFNL3Q8IZI9 196 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 OTUD7AQ8TE49 926 aaPredicted RBP14.45□□□□□ -0.1
AGRN-207ENST00000478677 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.45□□□□□ -0.18e-10■■□□□ 12.4
AGRN-207ENST00000478677 ACAD9Q9H845 621 aa14.45□□□□□ -0.1
AGRN-207ENST00000478677 SALL3Q9BXA9 1300 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 LCHNA4D1U4 455 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 DYNC1LI2O43237 492 aaPredicted RBP14.44□□□□□ -0.1
AGRN-207ENST00000478677 ZBED4O75132 1171 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 TTLL1O95922 423 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 MKRN4PQ13434 485 aaPredicted RBP14.44□□□□□ -0.1
AGRN-207ENST00000478677 EEPD1Q7L9B9 569 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 PI4K2BQ8TCG2 481 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 CLEC4DQ8WXI8 215 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 CHMP4CQ96CF2 233 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 LRFN3Q9BTN0 628 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 SLC28A3Q9HAS3 691 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 FBXO40Q9UH90 709 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
AGRN-207ENST00000478677 NFIBO00712 420 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 RNF113AO15541 343 aaKnown RBP14.43□□□□□ -0.1
AGRN-207ENST00000478677 EDNRBP24530 442 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 DUSP28Q4G0W2 176 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 PPP2R2DQ66LE6 453 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 TTBK2Q6IQ55 1244 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 TRAF7Q6Q0C0 670 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 KCTD1Q719H9 257 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 TMCO2Q7Z6W1 182 aaPredicted RBP14.43□□□□□ -0.1
AGRN-207ENST00000478677 CERS4Q9HA82 394 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 MSRAQ9UJ68 235 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 Q9Y3F1 56 aa14.43□□□□□ -0.1
AGRN-207ENST00000478677 TLR3O15455 904 aaKnown RBP14.42□□□□□ -0.1
AGRN-207ENST00000478677 CABYRO75952 493 aa14.42□□□□□ -0.1
AGRN-207ENST00000478677 ARIH2O95376 493 aa14.42□□□□□ -0.1
AGRN-207ENST00000478677 FGRP09769 529 aa14.42□□□□□ -0.1
AGRN-207ENST00000478677 ATP2A2P16615 1042 aaKnown RBP14.42□□□□□ -0.1
AGRN-207ENST00000478677 MCCP23508 829 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms