RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 NSMFQ6X4W1 530 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 RUFY3Q7L099 469 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 SGMS1Q86VZ5 419 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 CMTR1Q8N1G2 835 aaKnown RBP8.02□□□□□ -1.13
BRCA1-215ENST00000478531 CHST13Q8NET6 341 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 NPLOC4Q8TAT6 608 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 ARMC5Q96C12 935 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 DDX11Q96FC9 970 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 JMJD4Q9H9V9 463 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 FLRT1Q9NZU1 646 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 FBXO40Q9UH90 709 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 BRPF3Q9ULD4 1205 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 CYP46A1Q9Y6A2 500 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 GOLGA8AA7E2F4 631 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 NFIBO00712 420 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 ZBTB43O43298 467 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 CALM1P0DP23 149 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 CALM2P0DP24 149 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 CALM3P0DP25 149 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 XRCC5P13010 732 aaKnown RBP8.01□□□□□ -1.13
BRCA1-215ENST00000478531 PRKAR2AP13861 404 aaKnown RBP8.01□□□□□ -1.13
BRCA1-215ENST00000478531 ABRAQ8N0Z2 381 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 CCDC82Q8N4S0 544 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 PXYLP1Q8TE99 480 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 SLC5A4Q9NY91 659 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 PTPDC1A2A3K4 754 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 ZBTB5O15062 677 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 CYTH3O43739 400 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 CCL5P13501 91 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 CYP2C19P33261 490 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 RTN1Q16799 776 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 SLC35G1Q2M3R5 365 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 TKFCQ3LXA3 575 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 FBXO11Q86XK2 927 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 FANCBQ8NB91 859 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 PIGSQ96S52 555 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 LARP6Q9BRS8 491 aaKnown RBP8.01□□□□□ -1.13
BRCA1-215ENST00000478531 TMEM106CQ9BVX2 250 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 RNF208Q9H0X6 261 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 UNC93B1Q9H1C4 597 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 ZSWIM6Q9HCJ5 1215 aa8.01□□□□□ -1.13
BRCA1-215ENST00000478531 A1CFQ9NQ94 594 aaKnown RBP8.01□□□□□ -1.13
BRCA1-215ENST00000478531 LRRC37A2A6NM11 1700 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 CEP290O15078 2479 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 PFASO15067 1338 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 hCG_1642624A0A1W2PR95 340 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 HOXC6P09630 235 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 METAP2P50579 478 aaKnown RBP eCLIP8□□□□□ -1.13
BRCA1-215ENST00000478531 ANAPC15P60006 121 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 CNTN2Q02246 1040 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 CACNB2Q08289 660 aaPredicted RBP8□□□□□ -1.13
BRCA1-215ENST00000478531 MFSD14CQ5VZR4 134 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 SLC30A10Q6XR72 485 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 TMTC3Q6ZXV5 915 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 NOL8Q76FK4 1167 aaKnown RBP8□□□□□ -1.13
BRCA1-215ENST00000478531 TRMT44Q8IYL2 757 aaKnown RBP8□□□□□ -1.13
BRCA1-215ENST00000478531 SRBD1Q8N5C6 995 aaKnown RBP8□□□□□ -1.13
BRCA1-215ENST00000478531 MAML3Q96JK9 1138 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 MAP3K14Q99558 947 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 TM6SF1Q9BZW5 370 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 RIOX1Q9H6W3 641 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 PDRG1Q9NUG6 133 aa8□□□□□ -1.13
BRCA1-215ENST00000478531 SEC63Q9UGP8 760 aaKnown RBP8□□□□□ -1.13
BRCA1-215ENST00000478531 ABCB11O95342 1321 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 PDE4DIPQ5VU43 2346 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 POTEB2H3BUK9 544 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 PPP1R11O60927 126 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 CALML3P27482 149 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 CNGA1P29973 690 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 GNAQP50148 359 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 TOB2Q14106 344 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 CLEC4DQ8WXI8 215 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 RRP36Q96EU6 259 aaKnown RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 PURBQ96QR8 312 aaKnown RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 SPZ1Q9BXG8 430 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 AMNQ9BXJ7 453 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 RBM28Q9NW13 759 aaKnown RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 CYP39A1Q9NYL5 469 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 PNMA2Q9UL42 364 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 PCDHA1Q9Y5I3 950 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 DDX49Q9Y6V7 483 aaKnown RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 DNAJC25-GNG10A0A024R161 153 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 PNMA6FA0A0J9YX94 578 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 POTEFA5A3E0 1075 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 CDC27P30260 824 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 CCND3P30281 292 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 STK3Q13188 491 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 BAATQ14032 418 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 ZNF792Q3KQV3 632 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 OLFML2BQ68BL8 750 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 RNF207Q6ZRF8 634 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 MTMR8Q96EF0 704 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 LZTS2Q9BRK4 669 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 TINF2Q9BSI4 451 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 C22orf23Q9BZE7 217 aa7.99□□□□□ -1.13
BRCA1-215ENST00000478531 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 UPF2Q9HAU5 1272 aaKnown RBP7.99□□□□□ -1.13
BRCA1-215ENST00000478531 RPTORQ8N122 1335 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms