RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 DIRC2Q96SL1 478 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 DSCC1Q9BVC3 393 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 NSUN3Q9H649 340 aaKnown RBP5.78□□□□□ -1.48
GPNMB-210ENST00000478451 FAM86C1Q9NVL1 165 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 CNTLNQ9NXG0 1405 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 GPR160Q9UJ42 338 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 INPP5FQ9Y2H2 1132 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 IFT140Q96RY7 1462 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 PTPRKQ15262 1439 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 TSPAN15O95858 294 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 TP53P04637 393 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 ZSCAN22P10073 491 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 BMP8BP34820 402 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 AXDND1Q5T1B0 1012 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 ZPBP2Q6X784 338 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 DBX2Q6ZNG2 339 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 C19orf47Q8N9M1 422 aaKnown RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 FCRL2Q96LA5 508 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 ANP32EQ9BTT0 268 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 EPB41L4BQ9H329 900 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 CWC22Q9HCG8 908 aaKnown RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 ZNF214Q9UL59 606 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 SLC12A7Q9Y666 1083 aa5.77□□□□□ -1.49
GPNMB-210ENST00000478451 TDRD9Q8NDG6 1382 aaKnown RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 RPRD2Q5VT52 1461 aaKnown RBP5.77□□□□□ -1.49
GPNMB-210ENST00000478451 LTBP3Q9NS15 1303 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 ZNF205O95201 554 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 GSNP06396 782 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 ENDOUP21128 410 aaKnown RBP5.76□□□□□ -1.49
GPNMB-210ENST00000478451 KIR2DL1P43626 348 aaPredicted RBP5.76□□□□□ -1.49
GPNMB-210ENST00000478451 KIR2DL2P43627 348 aaPredicted RBP5.76□□□□□ -1.49
GPNMB-210ENST00000478451 CPLX3Q8WVH0 158 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 SHDQ96IW2 340 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 SEC16BQ96JE7 1060 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 PPP1R16BQ96T49 567 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 SLC6A17Q9H1V8 727 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 GP6Q9HCN6 339 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 CDK11AQ9UQ88 783 aaPredicted RBP5.76□□□□□ -1.49
GPNMB-210ENST00000478451 KDM6BO15054 1643 aa5.76□□□□□ -1.49
GPNMB-210ENST00000478451 EIF4G3O43432 1585 aaKnown RBP5.76□□□□□ -1.49
GPNMB-210ENST00000478451 DAPK1P53355 1430 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 CDK13Q14004 1512 aaKnown RBP5.75□□□□□ -1.49
GPNMB-210ENST00000478451 KIAA0586Q9BVV6 1533 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 CDC42BPAQ5VT25 1732 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 NOTOA8MTQ0 251 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 PSPNO60542 156 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 SNX17Q15036 470 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 ANKRD39Q53RE8 183 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 NOL9Q5SY16 702 aaKnown RBP5.75□□□□□ -1.49
GPNMB-210ENST00000478451 CEP128Q6ZU80 1094 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 FBXO15Q8NCQ5 510 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-210ENST00000478451 INTS4Q96HW7 963 aaKnown RBP5.75□□□□□ -1.49
GPNMB-210ENST00000478451 HHIPL1Q96JK4 782 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 TINF2Q9BSI4 451 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 CDADC1Q9BWV3 514 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 PHAXQ9H814 394 aaKnown RBP5.75□□□□□ -1.49
GPNMB-210ENST00000478451 DCP1AQ9NPI6 582 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-210ENST00000478451 ERVK13-1Q9NX77 482 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 STRIP2Q9ULQ0 834 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 YBX2Q9Y2T7 364 aaKnown RBP5.75□□□□□ -1.49
GPNMB-210ENST00000478451 ZNF451Q9Y4E5 1061 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 FHOD1Q9Y613 1164 aa5.75□□□□□ -1.49
GPNMB-210ENST00000478451 A0A1W2PQH9 124 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 H0Y8X5 98 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 CBFA2T2O43439 604 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 NRDCO43847 1150 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 ITGA4P13612 1032 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 VAV1P15498 845 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 CD247P20963 164 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 ZNF445P59923 1031 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 SLC14A2Q15849 920 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 GNPTABQ3T906 1256 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 CWF19L1Q69YN2 538 aaKnown RBP5.74□□□□□ -1.49
GPNMB-210ENST00000478451 SYDE1Q6ZW31 735 aaPredicted RBP5.74□□□□□ -1.49
GPNMB-210ENST00000478451 NLRX1Q86UT6 975 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 IRF2BP1Q8IU81 584 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 BRF1Q92994 677 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 SHISA4Q96DD7 197 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 CAPN10Q9HC96 672 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 AP5S1Q9NUS5 200 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 GPR55Q9Y2T6 319 aaPredicted RBP5.74□□□□□ -1.49
GPNMB-210ENST00000478451 NCOA1Q15788 1441 aa5.74□□□□□ -1.49
GPNMB-210ENST00000478451 ADGRL2O95490 1459 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 CAMSAP2Q08AD1 1489 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 TEX14Q8IWB6 1497 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 MAGI1Q96QZ7 1491 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-210ENST00000478451 EFEMP2O95967 443 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 GALK1P51570 392 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 ZC3H6P61129 1189 aaKnown RBP5.73□□□□□ -1.49
GPNMB-210ENST00000478451 TCEAL1Q15170 157 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 PPP2R5EQ16537 467 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 NAALADL2Q58DX5 795 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 RTP2Q5QGT7 225 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 AMIGO3Q86WK7 504 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 FIBCD1Q8N539 461 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 HAUS7Q99871 368 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 KCNK12Q9HB15 430 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 USP35Q9P2H5 1018 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 TNFRSF10DQ9UBN6 386 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 PCDHB10Q9UN67 800 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms