RNA–Protein interactions for RNA: ENST00000478405.1

SPIN3-203, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 1,620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-203ENST00000478405 MCOLN1Q9GZU1 580 aa20.35■□□□□ 0.85
SPIN3-203ENST00000478405 PTCH2Q9Y6C5 1203 aa20.35■□□□□ 0.85
SPIN3-203ENST00000478405 V9GY48 417 aaPredicted RBP20.35■□□□□ 0.85
SPIN3-203ENST00000478405 hCG_1642624A0A1W2PR95 340 aa20.34■□□□□ 0.85
SPIN3-203ENST00000478405 MAP2K5Q13163 448 aa20.34■□□□□ 0.85
SPIN3-203ENST00000478405 FBXO46Q6PJ61 603 aaPredicted RBP20.34■□□□□ 0.85
SPIN3-203ENST00000478405 DPP9Q86TI2 863 aa20.34■□□□□ 0.85
SPIN3-203ENST00000478405 DDX11Q96FC9 970 aa20.34■□□□□ 0.85
SPIN3-203ENST00000478405 SLKQ9H2G2 1235 aaPredicted RBP20.34■□□□□ 0.85
SPIN3-203ENST00000478405 SEC63Q9UGP8 760 aaKnown RBP20.34■□□□□ 0.85
SPIN3-203ENST00000478405 PCDHA1Q9Y5I3 950 aa20.34■□□□□ 0.85
SPIN3-203ENST00000478405 A0A0G2JMZ2 1700 aa20.33■□□□□ 0.85
SPIN3-203ENST00000478405 COBLO75128 1261 aa20.33■□□□□ 0.84
SPIN3-203ENST00000478405 RGS2P41220 211 aa20.33■□□□□ 0.84
SPIN3-203ENST00000478405 IRF5Q13568 498 aa20.33■□□□□ 0.84
SPIN3-203ENST00000478405 NID2Q14112 1375 aa20.33■□□□□ 0.84
SPIN3-203ENST00000478405 PARP14Q460N5 1801 aa20.33■□□□□ 0.84
SPIN3-203ENST00000478405 NFIBO00712 420 aa20.32■□□□□ 0.84
SPIN3-203ENST00000478405 PGK2P07205 417 aa20.32■□□□□ 0.84
SPIN3-203ENST00000478405 NTRK3Q16288 839 aa20.32■□□□□ 0.84
SPIN3-203ENST00000478405 ME3Q16798 604 aa20.32■□□□□ 0.84
SPIN3-203ENST00000478405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.32■□□□□ 0.84
SPIN3-203ENST00000478405 CLEC4DQ8WXI8 215 aa20.32■□□□□ 0.84
SPIN3-203ENST00000478405 ABCB11O95342 1321 aa20.32■□□□□ 0.84
SPIN3-203ENST00000478405 PFKFB2O60825 505 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 XRCC5P13010 732 aaKnown RBP20.31■□□□□ 0.84
SPIN3-203ENST00000478405 SCRN1Q12765 414 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 NSMFQ6X4W1 530 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 A1CFQ9NQ94 594 aaKnown RBP20.31■□□□□ 0.84
SPIN3-203ENST00000478405 LIMCH1Q9UPQ0 1083 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 MRPL11Q9Y3B7 192 aaKnown RBP20.31■□□□□ 0.84
SPIN3-203ENST00000478405 CNTNAP5Q8WYK1 1306 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 CPLX1O14810 134 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 ADCY3O60266 1144 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 PPFIA3O75145 1194 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 HOXC6P09630 235 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 TRAF1Q13077 416 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 NPLOC4Q8TAT6 608 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 SLC5A4Q9NY91 659 aa20.31■□□□□ 0.84
SPIN3-203ENST00000478405 ST18O60284 1047 aa20.3■□□□□ 0.84
SPIN3-203ENST00000478405 LARGE1O95461 756 aa20.3■□□□□ 0.84
SPIN3-203ENST00000478405 IFNAR1P17181 557 aa20.3■□□□□ 0.84
SPIN3-203ENST00000478405 NECAB1Q8N987 351 aa20.3■□□□□ 0.84
SPIN3-203ENST00000478405 IL27Q8NEV9 243 aa20.3■□□□□ 0.84
SPIN3-203ENST00000478405 TBC1D5Q92609 795 aa20.3■□□□□ 0.84
SPIN3-203ENST00000478405 PHKBQ93100 1093 aa20.3■□□□□ 0.84
SPIN3-203ENST00000478405 CYP39A1Q9NYL5 469 aa20.3■□□□□ 0.84
SPIN3-203ENST00000478405 ZSWIM8A7E2V4 1837 aa20.29■□□□□ 0.84
SPIN3-203ENST00000478405 DNAJC25-GNG10A0A024R161 153 aa20.29■□□□□ 0.84
SPIN3-203ENST00000478405 ELNP15502 786 aa20.29■□□□□ 0.84
SPIN3-203ENST00000478405 GRK4P32298 578 aa20.29■□□□□ 0.84
SPIN3-203ENST00000478405 BAATQ14032 418 aaPredicted RBP20.29■□□□□ 0.84
SPIN3-203ENST00000478405 CCL14Q16627 93 aa20.29■□□□□ 0.84
SPIN3-203ENST00000478405 PXYLP1Q8TE99 480 aa20.29■□□□□ 0.84
SPIN3-203ENST00000478405 APBA2Q99767 749 aa20.29■□□□□ 0.84
SPIN3-203ENST00000478405 PTPDC1A2A3K4 754 aa20.28■□□□□ 0.84
SPIN3-203ENST00000478405 PRPF3O43395 683 aaKnown RBP20.28■□□□□ 0.84
SPIN3-203ENST00000478405 ZNF792Q3KQV3 632 aa20.28■□□□□ 0.84
SPIN3-203ENST00000478405 CPLX2Q6PUV4 134 aaKnown RBP20.28■□□□□ 0.84
SPIN3-203ENST00000478405 MCF2L2Q86YR7 1114 aa20.28■□□□□ 0.84
SPIN3-203ENST00000478405 RGS22Q8NE09 1264 aa20.28■□□□□ 0.84
SPIN3-203ENST00000478405 COL11A1P12107 1806 aaPredicted RBP20.28■□□□□ 0.84
SPIN3-203ENST00000478405 POTEB2H3BUK9 544 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
SPIN3-203ENST00000478405 CNTN2Q02246 1040 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 SLC9C1Q4G0N8 1177 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 RNF207Q6ZRF8 634 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 HEATR3Q7Z4Q2 680 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 SLAIN1Q8ND83 568 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 SH3TC2Q8TF17 1288 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 SLC26A6Q9BXS9 759 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 FLRT1Q9NZU1 646 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 DIS3Q9Y2L1 958 aaKnown RBP20.27■□□□□ 0.84
SPIN3-203ENST00000478405 PFASO15067 1338 aa20.27■□□□□ 0.84
SPIN3-203ENST00000478405 OPLAHO14841 1288 aa20.27■□□□□ 0.83
SPIN3-203ENST00000478405 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.83
SPIN3-203ENST00000478405 SSRP1Q08945 709 aaKnown RBP20.27■□□□□ 0.83
SPIN3-203ENST00000478405 TRIB2Q92519 343 aa20.27■□□□□ 0.83
SPIN3-203ENST00000478405 ZSCAN31Q96LW9 406 aaPredicted RBP20.27■□□□□ 0.83
SPIN3-203ENST00000478405 RNF26Q9BY78 433 aaPredicted RBP20.27■□□□□ 0.83
SPIN3-203ENST00000478405 BIN2Q9UBW5 565 aaPredicted RBP20.27■□□□□ 0.83
SPIN3-203ENST00000478405 BAZ2BQ9UIF8 2168 aaKnown RBP20.26■□□□□ 0.83
SPIN3-203ENST00000478405 CFBP00751 764 aa20.26■□□□□ 0.83
SPIN3-203ENST00000478405 CALML3P27482 149 aa20.26■□□□□ 0.83
SPIN3-203ENST00000478405 PFKFB3Q16875 520 aaPredicted RBP20.26■□□□□ 0.83
SPIN3-203ENST00000478405 TRMT44Q8IYL2 757 aaKnown RBP20.26■□□□□ 0.83
SPIN3-203ENST00000478405 FAM133AQ8N9E0 248 aa20.26■□□□□ 0.83
SPIN3-203ENST00000478405 GPKOWQ92917 476 aaPredicted RBP eCLIP20.26■□□□□ 0.83
SPIN3-203ENST00000478405 GTF3C6Q969F1 213 aa20.26■□□□□ 0.83
SPIN3-203ENST00000478405 MAML3Q96JK9 1138 aa20.26■□□□□ 0.83
SPIN3-203ENST00000478405 PURBQ96QR8 312 aaKnown RBP20.26■□□□□ 0.83
SPIN3-203ENST00000478405 RBM27Q9P2N5 1060 aaKnown RBP20.26■□□□□ 0.83
SPIN3-203ENST00000478405 DTNBO60941 627 aa20.25■□□□□ 0.83
SPIN3-203ENST00000478405 CD2BP2O95400 341 aaKnown RBP20.25■□□□□ 0.83
SPIN3-203ENST00000478405 PKN1Q16512 942 aa20.25■□□□□ 0.83
SPIN3-203ENST00000478405 WWC2Q6AWC2 1192 aa20.25■□□□□ 0.83
SPIN3-203ENST00000478405 SLC30A10Q6XR72 485 aa20.25■□□□□ 0.83
SPIN3-203ENST00000478405 TRIM22Q8IYM9 498 aa20.25■□□□□ 0.83
SPIN3-203ENST00000478405 MAF1Q9H063 256 aa20.25■□□□□ 0.83
SPIN3-203ENST00000478405 CDKL5O76039 1030 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms