RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 IDEP14735 1019 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 AMOTL1Q8IY63 956 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 THAP9Q9H5L6 903 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 NRXN2Q9P2S2 1712 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 RTCBQ9Y3I0 505 aaKnown RBP16.62■□□□□ 0.25
U2AF1-210ENST00000478282 IPO7O95373 1038 aaKnown RBP16.62■□□□□ 0.25
U2AF1-210ENST00000478282 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 GBP6Q6ZN66 633 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 CATIPQ7Z7H3 387 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 CCDC170Q8IYT3 715 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 TTYH3Q9C0H2 523 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 GEMIN8Q9NWZ8 242 aaKnown RBP16.62■□□□□ 0.25
U2AF1-210ENST00000478282 GNPATO15228 680 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 DNM2P50570 870 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 PMS1P54277 932 aaKnown RBP16.62■□□□□ 0.25
U2AF1-210ENST00000478282 MMGT1Q8N4V1 131 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
U2AF1-210ENST00000478282 CAPS2Q9BXY5 557 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 JADE2Q9NQC1 790 aa16.62■□□□□ 0.25
U2AF1-210ENST00000478282 ZNHIT6Q9NWK9 470 aaKnown RBP16.62■□□□□ 0.25
U2AF1-210ENST00000478282 MINDY4BA8MYZ0 360 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 PDE8AO60658 829 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 ERLIN2O94905 339 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 SRGNP10124 158 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 RUBCNQ92622 972 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 ZSCAN10Q96SZ4 725 aaPredicted RBP16.61■□□□□ 0.25
U2AF1-210ENST00000478282 NHEJ1Q9H9Q4 299 aaPredicted RBP16.61■□□□□ 0.25
U2AF1-210ENST00000478282 ANAPC4Q9UJX5 808 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 FAM169AQ9Y6X4 670 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 GRIN2DO15399 1336 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 GOLGA8KD6RF30 607 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 MCM7P33993 719 aa16.61■□□□□ 0.25
U2AF1-210ENST00000478282 MAGEC2Q9UBF1 373 aaPredicted RBP16.61■□□□□ 0.25
U2AF1-210ENST00000478282 EIF3HO15372 352 aaKnown RBP eCLIP16.6■□□□□ 0.25
U2AF1-210ENST00000478282 STAT6P42226 847 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 IFIT1BQ5T764 474 aaKnown RBP16.6■□□□□ 0.25
U2AF1-210ENST00000478282 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 SND1Q7KZF4 910 aaKnown RBP eCLIP16.6■□□□□ 0.25
U2AF1-210ENST00000478282 SH3GL2Q99962 352 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 AGPAT5Q9NUQ2 364 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 TRMT112Q9UI30 125 aaKnown RBP16.6■□□□□ 0.25
U2AF1-210ENST00000478282 DLEC1Q9Y238 1755 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 TMTC3Q6ZXV5 915 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 BCAS4Q8TDM0 211 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 TRIM47Q96LD4 638 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 NUP58Q9BVL2 599 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 DUSP10Q9Y6W6 482 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 CNTNAP5Q8WYK1 1306 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 B4DLN1 442 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
U2AF1-210ENST00000478282 ITIH3Q06033 890 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 TROAPQ12815 778 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 ZNF572Q7Z3I7 529 aaPredicted RBP16.6■□□□□ 0.25
U2AF1-210ENST00000478282 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
U2AF1-210ENST00000478282 SNX12Q9UMY4 172 aa16.6■□□□□ 0.25
U2AF1-210ENST00000478282 SHTN1A0MZ66 631 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 MACROD2A1Z1Q3 448 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 SNAP23O00161 211 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 CALM1P0DP23 149 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 CALM2P0DP24 149 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 CALM3P0DP25 149 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 TRIM21P19474 475 aaKnown RBP16.59■□□□□ 0.25
U2AF1-210ENST00000478282 LIG3P49916 1009 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 ZBED6P86452 979 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 ARL6IP4Q66PJ3 421 aaKnown RBP16.59■□□□□ 0.25
U2AF1-210ENST00000478282 MCTP2Q6DN12 878 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 CREG2Q8IUH2 290 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 TSGA10Q9BZW7 698 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 EHD4Q9H223 541 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 EXOC1Q9NV70 894 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 VAV2P52735 878 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 GNGT1P63211 74 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 KIF5AQ12840 1032 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 KCNB1Q14721 858 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
U2AF1-210ENST00000478282 SDR42E1Q8WUS8 393 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 KAT2BQ92831 832 aa16.59■□□□□ 0.25
U2AF1-210ENST00000478282 RRP36Q96EU6 259 aaKnown RBP16.59■□□□□ 0.25
U2AF1-210ENST00000478282 RASSF10A6NK89 507 aa16.58■□□□□ 0.25
U2AF1-210ENST00000478282 PSMA7O14818 248 aa16.58■□□□□ 0.25
U2AF1-210ENST00000478282 EZH2Q15910 746 aaKnown RBP16.58■□□□□ 0.25
U2AF1-210ENST00000478282 SWT1Q5T5J6 900 aaKnown RBP16.58■□□□□ 0.25
U2AF1-210ENST00000478282 SMIM22K7EJ46 135 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 OPA1O60313 960 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 TTI2Q6NXR4 508 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 TUBGCP2Q9BSJ2 902 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 DISC1Q9NRI5 854 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 DDAH1O94760 285 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 NLRP5P59047 1200 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 CYP27A1Q02318 531 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 SF3B2Q13435 895 aaKnown RBP16.58■□□□□ 0.24
U2AF1-210ENST00000478282 TRIM58Q8NG06 486 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 HDAC7Q8WUI4 952 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 NCAPGQ9BPX3 1015 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 LRP2BPQ9P2M1 347 aa16.58■□□□□ 0.24
U2AF1-210ENST00000478282 DMGDHQ9UI17 866 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms