RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 FGAP02671 866 aa19.77■□□□□ 0.76
TRIM13-208ENST00000478111 BEX3Q00994 111 aa19.77■□□□□ 0.76
TRIM13-208ENST00000478111 HDAC1Q13547 482 aaPredicted RBP19.77■□□□□ 0.76
TRIM13-208ENST00000478111 C16orf59Q7L2K0 433 aa19.77■□□□□ 0.76
TRIM13-208ENST00000478111 FAM227BQ96M60 508 aa19.77■□□□□ 0.76
TRIM13-208ENST00000478111 CYP39A1Q9NYL5 469 aa19.77■□□□□ 0.76
TRIM13-208ENST00000478111 MYO9BQ13459 2157 aa19.77■□□□□ 0.75
TRIM13-208ENST00000478111 MROH7Q68CQ1 1323 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 A0A0U1RQG5 324 aaPredicted RBP19.76■□□□□ 0.75
TRIM13-208ENST00000478111 ASB14A6NK59 587 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 PTGS1P23219 599 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 TNFAIP2Q03169 654 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 TMEM63BQ5T3F8 832 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 TTBK2Q6IQ55 1244 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 MFSD5Q6N075 450 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 BTNL9Q6UXG8 535 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRIM13-208ENST00000478111 FAM126BQ8IXS8 530 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 DCAF4Q8WV16 495 aa19.76■□□□□ 0.75
TRIM13-208ENST00000478111 PURBQ96QR8 312 aaKnown RBP19.76■□□□□ 0.75
TRIM13-208ENST00000478111 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.76■□□□□ 0.758e-10■■■□□ 19.2
TRIM13-208ENST00000478111 SMPD1P17405 629 aa19.75■□□□□ 0.75
TRIM13-208ENST00000478111 TAPT1Q6NXT6 567 aa19.75■□□□□ 0.75
TRIM13-208ENST00000478111 SLC43A3Q8NBI5 491 aa19.75■□□□□ 0.75
TRIM13-208ENST00000478111 MYLIPQ8WY64 445 aa19.75■□□□□ 0.75
TRIM13-208ENST00000478111 VTI1AQ96AJ9 217 aa19.75■□□□□ 0.75
TRIM13-208ENST00000478111 RANBP17Q9H2T7 1088 aaKnown RBP19.75■□□□□ 0.75
TRIM13-208ENST00000478111 PDGFCQ9NRA1 345 aa19.75■□□□□ 0.75
TRIM13-208ENST00000478111 MTMR7Q9Y216 660 aa19.75■□□□□ 0.75
TRIM13-208ENST00000478111 CHD7Q9P2D1 2997 aa19.75■□□□□ 0.75
TRIM13-208ENST00000478111 TTC28Q96AY4 2481 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 CD4P01730 458 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 ICAM1P05362 532 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 HSPD1P10809 573 aaKnown RBP19.74■□□□□ 0.75
TRIM13-208ENST00000478111 SLC16A2P36021 539 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 MCMDC2Q4G0Z9 681 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 ZNF589Q86UQ0 364 aaPredicted RBP19.74■□□□□ 0.75
TRIM13-208ENST00000478111 TICAM2Q86XR7 235 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 MORC4Q8TE76 937 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 TMEM47Q9BQJ4 181 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 COL25A1Q9BXS0 654 aaPredicted RBP19.74■□□□□ 0.75
TRIM13-208ENST00000478111 TCP11L1Q9NUJ3 509 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 CCPG1Q9ULG6 757 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 GRIN2DO15399 1336 aa19.74■□□□□ 0.75
TRIM13-208ENST00000478111 TMEM265A0A087WTH1 108 aa19.73■□□□□ 0.75
TRIM13-208ENST00000478111 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.73■□□□□ 0.75
TRIM13-208ENST00000478111 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.73■□□□□ 0.75
TRIM13-208ENST00000478111 TMEM240Q5SV17 173 aa19.73■□□□□ 0.75
TRIM13-208ENST00000478111 RASIP1Q5U651 963 aa19.73■□□□□ 0.75
TRIM13-208ENST00000478111 CXCL17Q6UXB2 119 aa19.73■□□□□ 0.75
TRIM13-208ENST00000478111 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
TRIM13-208ENST00000478111 ZMYM6O95789 1325 aa19.73■□□□□ 0.75
TRIM13-208ENST00000478111 DYNC1LI2O43237 492 aaPredicted RBP19.72■□□□□ 0.75
TRIM13-208ENST00000478111 TOP1P11387 765 aaKnown RBP19.72■□□□□ 0.75
TRIM13-208ENST00000478111 CSF2RAP15509 400 aa19.72■□□□□ 0.75
TRIM13-208ENST00000478111 NMIQ13287 307 aaPredicted RBP19.72■□□□□ 0.75
TRIM13-208ENST00000478111 FSCN1Q16658 493 aaKnown RBP19.72■□□□□ 0.75
TRIM13-208ENST00000478111 CCDC96Q2M329 555 aa19.72■□□□□ 0.75
TRIM13-208ENST00000478111 RRP12Q5JTH9 1297 aaKnown RBP19.72■□□□□ 0.75
TRIM13-208ENST00000478111 IQSEC1Q6DN90 963 aa19.72■□□□□ 0.75
TRIM13-208ENST00000478111 NSMFQ6X4W1 530 aa19.72■□□□□ 0.75
TRIM13-208ENST00000478111 NOL8Q76FK4 1167 aaKnown RBP19.72■□□□□ 0.75
TRIM13-208ENST00000478111 EEPD1Q7L9B9 569 aa19.72■□□□□ 0.75
TRIM13-208ENST00000478111 TLK2Q86UE8 772 aa19.72■□□□□ 0.75
TRIM13-208ENST00000478111 FBXO16Q8IX29 292 aaPredicted RBP19.72■□□□□ 0.75
TRIM13-208ENST00000478111 MAFAQ8NHW3 353 aaPredicted RBP19.72■□□□□ 0.75
TRIM13-208ENST00000478111 PPIGQ13427 754 aaKnown RBP eCLIP19.71■□□□□ 0.756e-7■□□□□ 9.7
TRIM13-208ENST00000478111 BAATQ14032 418 aaPredicted RBP19.71■□□□□ 0.75
TRIM13-208ENST00000478111 SYDE2Q5VT97 1194 aa19.71■□□□□ 0.75
TRIM13-208ENST00000478111 PPP1R12CQ9BZL4 782 aa19.71■□□□□ 0.75
TRIM13-208ENST00000478111 TOMM22Q9NS69 142 aa19.71■□□□□ 0.75
TRIM13-208ENST00000478111 Q9Y3F1 56 aa19.71■□□□□ 0.75
TRIM13-208ENST00000478111 GBF1Q92538 1859 aa19.71■□□□□ 0.75
TRIM13-208ENST00000478111 NFIBO00712 420 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 CABYRO75952 493 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 DNAJB2P25686 324 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 CYP2C18P33260 490 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 HAND2P61296 217 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 GRIN2CQ14957 1233 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 LNPKQ9C0E8 428 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 AP5M1Q9H0R1 490 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 VTA1Q9NP79 307 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 GPCPD1Q9NPB8 672 aa19.7■□□□□ 0.74
TRIM13-208ENST00000478111 FRMPD2Q68DX3 1309 aaPredicted RBP19.7■□□□□ 0.74
TRIM13-208ENST00000478111 TLR3O15455 904 aaKnown RBP19.69■□□□□ 0.74
TRIM13-208ENST00000478111 SNHG28P0DPA3 235 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 ACRP10323 421 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 PDHBP11177 359 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 ITGA7Q13683 1181 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 ZNF365Q70YC5 407 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 SMC5Q8IY18 1101 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 TMEM199Q8N511 208 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 CLEC4DQ8WXI8 215 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 UMODL1Q5DID0 1318 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 CCDC171Q6TFL3 1326 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 MUC3AQ02505 3323 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 REV3LO60673 3130 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 TRANK1O15050 2925 aa19.69■□□□□ 0.74
TRIM13-208ENST00000478111 LAMA4Q16363 1823 aa19.68■□□□□ 0.74
TRIM13-208ENST00000478111 GRXCR1A8MXD5 290 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms