RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 SRRDQ9UH36 339 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 NOVA2Q9UNW9 492 aaKnown RBP8.46□□□□□ -1.06
USP33-208ENST00000477949 TRIM33Q9UPN9 1127 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 RIPOR2Q9Y4F9 1068 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 ADGRA2Q96PE1 1338 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 SYNGAP1Q96PV0 1343 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 CCL15-CCL14A0A0B4J2E2 113 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 IRS4O14654 1257 aaPredicted RBP8.45□□□□□ -1.06
USP33-208ENST00000477949 CCL15Q16663 113 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 C17orf99Q6UX52 265 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 Q6ZS46 218 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
USP33-208ENST00000477949 KIAA0825Q8IV33 1275 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 PIK3R5Q8WYR1 880 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 ELP3Q9H9T3 547 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 FAM13BQ9NYF5 915 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 ARAP2Q8WZ64 1704 aa8.45□□□□□ -1.06
USP33-208ENST00000477949 SGPL1O95470 568 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 GLB1P16278 677 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 EIF2S2P20042 333 aaKnown RBP8.44□□□□□ -1.06
USP33-208ENST00000477949 ATP2B4P23634 1241 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 AIMP1Q12904 312 aaKnown RBP8.44□□□□□ -1.06
USP33-208ENST00000477949 FAM109BQ6ICB4 259 aaPredicted RBP8.44□□□□□ -1.06
USP33-208ENST00000477949 C16orf46Q6P387 395 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 TDHQ8IZJ6 230 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 CERS5Q8N5B7 392 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 OR13H1Q8NG92 308 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 SAP130Q9H0E3 1048 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 RNF208Q9H0X6 261 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 ZCCHC17Q9NP64 241 aaKnown RBP8.44□□□□□ -1.06
USP33-208ENST00000477949 RAXQ9Y2V3 346 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 SPEF2Q9C093 1822 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 BAHCC1Q9P281 2608 aa8.44□□□□□ -1.06
USP33-208ENST00000477949 MGAMO43451 1857 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 PRMT3O60678 531 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 U2AF1L5P0DN76 240 aaPredicted RBP8.43□□□□□ -1.06
USP33-208ENST00000477949 KLRK1P26718 216 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 SSTR4P31391 388 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 MAGEA10P43363 369 aaPredicted RBP8.43□□□□□ -1.06
USP33-208ENST00000477949 GTF2A2P52657 109 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 U2AF1Q01081 240 aaKnown RBP eCLIP8.43□□□□□ -1.06
USP33-208ENST00000477949 VGLL4Q14135 290 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 PLBD2Q8NHP8 589 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 COL26A1Q96A83 441 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 SPACA7Q96KW9 195 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 TEPSINQ96N21 525 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 COA1Q9GZY4 146 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 IRS2Q9Y4H2 1338 aa8.43□□□□□ -1.06
USP33-208ENST00000477949 CLRN2A0PK11 232 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 BTBD19C9JJ37 291 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 GSC2O15499 205 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 PSMC4P43686 418 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 HYAL2Q12891 473 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 TRIP4Q15650 581 aaPredicted RBP8.42□□□□□ -1.06
USP33-208ENST00000477949 SUPT20HL1Q3ZLR7 823 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 LCE3BQ5TA77 95 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.42□□□□□ -1.06
USP33-208ENST00000477949 AGGF1Q8N302 714 aaeCLIP8.42□□□□□ -1.06
USP33-208ENST00000477949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP33-208ENST00000477949 DIS3LQ8TF46 1054 aaKnown RBP8.42□□□□□ -1.06
USP33-208ENST00000477949 UBL7Q96S82 380 aaPredicted RBP8.42□□□□□ -1.06
USP33-208ENST00000477949 PLEKHF1Q96S99 279 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 PAK6Q9NQU5 681 aaPredicted RBP8.42□□□□□ -1.06
USP33-208ENST00000477949 STOML1Q9UBI4 398 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 ZMYND8Q9ULU4 1186 aaPredicted RBP8.42□□□□□ -1.06
USP33-208ENST00000477949 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
USP33-208ENST00000477949 FNDC3AQ9Y2H6 1198 aaKnown RBP8.42□□□□□ -1.06
USP33-208ENST00000477949 MYPNQ86TC9 1320 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 PRKCZQ05513 592 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 RASA3Q14644 834 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 KIF22Q14807 665 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 DLGAP5Q15398 846 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 OCLNQ16625 522 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 TTC39BQ5VTQ0 682 aaPredicted RBP8.41□□□□□ -1.06
USP33-208ENST00000477949 TTLL5Q6EMB2 1281 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 GALNT11Q8NCW6 608 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 PAWRQ96IZ0 340 aaKnown RBP8.41□□□□□ -1.06
USP33-208ENST00000477949 PRMT6Q96LA8 375 aaPredicted RBP8.41□□□□□ -1.06
USP33-208ENST00000477949 MINPP1Q9UNW1 487 aa8.41□□□□□ -1.06
USP33-208ENST00000477949 FAM205AQ6ZU69 1335 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.06
USP33-208ENST00000477949 IGLV1-40P01703 118 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 SYN1P17600 705 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 CDC27P30260 824 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 CD68P34810 354 aaPredicted RBP8.4□□□□□ -1.06
USP33-208ENST00000477949 CD97P48960 835 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 CCT4P50991 539 aaKnown RBP8.4□□□□□ -1.06
USP33-208ENST00000477949 ELOAQ14241 798 aaKnown RBP8.4□□□□□ -1.06
USP33-208ENST00000477949 KRT24Q2M2I5 525 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 CEP135Q66GS9 1140 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 MCTP1Q6DN14 999 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 C7orf61Q8IZ16 206 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 ZBTB38Q8NAP3 1195 aaPredicted RBP8.4□□□□□ -1.06
USP33-208ENST00000477949 RAET1EQ8TD07 263 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 CEP41Q9BYV8 373 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 CHPF2Q9P2E5 772 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 CPA4Q9UI42 421 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 TSPYL4Q9UJ04 414 aa8.4□□□□□ -1.06
USP33-208ENST00000477949 GABRQQ9UN88 632 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms