RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 KATNBL1Q9H079 304 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 JMJD4Q9H9V9 463 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 LY9Q9HBG7 655 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 FBXO40Q9UH90 709 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 CEP290O15078 2479 aa20.63■□□□□ 0.89
PTPN7-209ENST00000477554 PPP1R11O60927 126 aaPredicted RBP20.62■□□□□ 0.89
PTPN7-209ENST00000477554 PARP1P09874 1014 aaKnown RBP20.62■□□□□ 0.89
PTPN7-209ENST00000477554 BAATQ14032 418 aaPredicted RBP20.62■□□□□ 0.89
PTPN7-209ENST00000477554 CCDC178Q5BJE1 867 aa20.62■□□□□ 0.89
PTPN7-209ENST00000477554 TMEM67Q5HYA8 995 aa20.62■□□□□ 0.89
PTPN7-209ENST00000477554 GPATCH4Q5T3I0 446 aaKnown RBP20.62■□□□□ 0.89
PTPN7-209ENST00000477554 MAMDC4Q6UXC1 1216 aa20.62■□□□□ 0.89
PTPN7-209ENST00000477554 ARMCX2Q7L311 632 aa20.62■□□□□ 0.89
PTPN7-209ENST00000477554 NECAB2Q7Z6G3 386 aa20.62■□□□□ 0.89
PTPN7-209ENST00000477554 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
PTPN7-209ENST00000477554 C11orf49Q9H6J7 331 aa20.62■□□□□ 0.89
PTPN7-209ENST00000477554 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.62■□□□□ 0.89
PTPN7-209ENST00000477554 MYH6P13533 1939 aa20.62■□□□□ 0.89
PTPN7-209ENST00000477554 PALM3A6NDB9 673 aaPredicted RBP20.61■□□□□ 0.89
PTPN7-209ENST00000477554 POTEB2H3BUK9 544 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 PRC1O43663 620 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 MYCNP04198 464 aaPredicted RBP20.61■□□□□ 0.89
PTPN7-209ENST00000477554 TROAPQ12815 778 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 QRICH1Q2TAL8 776 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 TKFCQ3LXA3 575 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 ASPRV1Q53RT3 343 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 ANKLE1Q8NAG6 615 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 ZHX1Q9UKY1 873 aaPredicted RBP20.61■□□□□ 0.89
PTPN7-209ENST00000477554 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.61■□□□□ 0.89
PTPN7-209ENST00000477554 CYTH3O43739 400 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 PGK1P00558 417 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 RXRAP19793 462 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 NT5C2P49902 561 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 GRM4Q14833 912 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 WTAPQ15007 396 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 LRRC26Q2I0M4 334 aa20.61■□□□□ 0.89
PTPN7-209ENST00000477554 SYNGAP1Q96PV0 1343 aa20.6■□□□□ 0.89
PTPN7-209ENST00000477554 MYADML2A6NDP7 307 aa20.6■□□□□ 0.89
PTPN7-209ENST00000477554 KLRF2D3W0D1 207 aa20.6■□□□□ 0.89
PTPN7-209ENST00000477554 EIF5BO60841 1220 aaKnown RBP20.6■□□□□ 0.89
PTPN7-209ENST00000477554 CPA1P15085 419 aa20.6■□□□□ 0.89
PTPN7-209ENST00000477554 EEPD1Q7L9B9 569 aa20.6■□□□□ 0.89
PTPN7-209ENST00000477554 PTPDC1A2A3K4 754 aa20.59■□□□□ 0.89
PTPN7-209ENST00000477554 SH2B2O14492 632 aaPredicted RBP20.59■□□□□ 0.89
PTPN7-209ENST00000477554 ACVR2BQ13705 512 aa20.59■□□□□ 0.89
PTPN7-209ENST00000477554 ZNF467Q7Z7K2 595 aaPredicted RBP20.59■□□□□ 0.89
PTPN7-209ENST00000477554 PDGFCQ9NRA1 345 aa20.59■□□□□ 0.89
PTPN7-209ENST00000477554 OPLAHO14841 1288 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 DHX16O60231 1041 aaKnown RBP20.58■□□□□ 0.88
PTPN7-209ENST00000477554 CALML3P27482 149 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 ATN1P54259 1190 aaPredicted RBP20.58■□□□□ 0.88
PTPN7-209ENST00000477554 LRRC41Q15345 812 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 C8orf34Q49A92 452 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 FBXO16Q8IX29 292 aaPredicted RBP20.58■□□□□ 0.88
PTPN7-209ENST00000477554 C7orf61Q8IZ16 206 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 CMTR1Q8N1G2 835 aaKnown RBP20.58■□□□□ 0.88
PTPN7-209ENST00000477554 PIBF1Q8WXW3 757 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 SENP6Q9GZR1 1112 aaPredicted RBP20.58■□□□□ 0.88
PTPN7-209ENST00000477554 COL20A1Q9P218 1284 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 CNPY2Q9Y2B0 182 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 WDR19Q8NEZ3 1342 aa20.58■□□□□ 0.88
PTPN7-209ENST00000477554 RPS6P62753 249 aaKnown RBP20.57■□□□□ 0.88
PTPN7-209ENST00000477554 CCDC144BQ3MJ40 725 aa20.57■□□□□ 0.88
PTPN7-209ENST00000477554 NUP133Q8WUM0 1156 aa20.57■□□□□ 0.88
PTPN7-209ENST00000477554 FERMT2Q96AC1 680 aa20.57■□□□□ 0.88
PTPN7-209ENST00000477554 MTMR8Q96EF0 704 aa20.57■□□□□ 0.88
PTPN7-209ENST00000477554 MSCO60682 206 aa20.56■□□□□ 0.88
PTPN7-209ENST00000477554 ADAMTS4O75173 837 aa20.56■□□□□ 0.88
PTPN7-209ENST00000477554 HOMER1Q86YM7 354 aa20.56■□□□□ 0.88
PTPN7-209ENST00000477554 ZNF654Q8IZM8 581 aa20.56■□□□□ 0.88
PTPN7-209ENST00000477554 MSL3Q8N5Y2 521 aaKnown RBP20.56■□□□□ 0.88
PTPN7-209ENST00000477554 PIGSQ96S52 555 aa20.56■□□□□ 0.88
PTPN7-209ENST00000477554 HTATIP2Q9BUP3 242 aa20.56■□□□□ 0.88
PTPN7-209ENST00000477554 XPNPEP3Q9NQH7 507 aa20.56■□□□□ 0.88
PTPN7-209ENST00000477554 ZMYND8Q9ULU4 1186 aaPredicted RBP20.56■□□□□ 0.88
PTPN7-209ENST00000477554 ERICH2A1L162 156 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 DNM1LO00429 736 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 EVI5O60447 810 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 PLEKHA8P1O95397 391 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 AKR1A1P14550 325 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 SYN1P17600 705 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 MCM5P33992 734 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 ADCYAP1R1P41586 468 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 ALDH5A1P51649 535 aaPredicted RBP20.55■□□□□ 0.88
PTPN7-209ENST00000477554 RNF207Q6ZRF8 634 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 NRBP1Q9UHY1 535 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 SYNRGQ9UMZ2 1314 aa20.55■□□□□ 0.88
PTPN7-209ENST00000477554 RARBP10826 455 aa20.54■□□□□ 0.88
PTPN7-209ENST00000477554 EXOSC10Q01780 885 aaKnown RBP20.54■□□□□ 0.88
PTPN7-209ENST00000477554 TAPT1Q6NXT6 567 aa20.54■□□□□ 0.88
PTPN7-209ENST00000477554 ABHD16BQ9H3Z7 469 aa20.54■□□□□ 0.88
PTPN7-209ENST00000477554 RIOX1Q9H6W3 641 aa20.54■□□□□ 0.88
PTPN7-209ENST00000477554 CTAGE5O15320 804 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 SART3Q15020 963 aaKnown RBP20.53■□□□□ 0.88
PTPN7-209ENST00000477554 CATIPQ7Z7H3 387 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 FBXO11Q86XK2 927 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 BACH2Q9BYV9 841 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 BRPF3Q9ULD4 1205 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 COLQQ9Y215 455 aaPredicted RBP20.53■□□□□ 0.88
PTPN7-209ENST00000477554 hCG_1642624A0A1W2PR95 340 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms