RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 PNMA6FA0A0J9YX94 578 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 CCP110O43303 1012 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 ADKP55263 362 aaKnown RBP12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 FKBP1AP62942 108 aaKnown RBP12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 TMEM139Q8IV31 216 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 TC2NQ8N9U0 490 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 KIF18AQ8NI77 898 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 LRRC15Q8TF66 581 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 CCDC17Q96LX7 622 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 CTAGE1Q96RT6 745 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 BAG1Q99933 345 aaPredicted RBP12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 MRIQ9BWK5 157 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 GDAQ9Y2T3 454 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZNF646O15015 1829 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 PLCG1P19174 1290 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 SLC16A2P36021 539 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 TECP42680 631 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 PRCPP42785 496 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 HDLBPQ00341 1268 aaKnown RBP12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 ORC2Q13416 577 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 FILIP1LQ4L180 1135 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 KCTD1Q719H9 257 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 DHX36Q9H2U1 1008 aaKnown RBP12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 KBTBD4Q9NVX7 518 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 ADD3Q9UEY8 706 aaKnown RBP12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 MAPK8IP1Q9UQF2 711 aa12.42□□□□□ -0.42
HLA-DMB-260ENST00000477537 DDTLA6NHG4 134 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 USP17L10C9JJH3 530 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 ARHGAP6O43182 974 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 KLRC4O43908 158 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 PPP1R11O60927 126 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 MYL1P05976 194 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 KCNB1Q14721 858 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 AOC3Q16853 763 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 GPATCH4Q5T3I0 446 aaKnown RBP12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 PPP1R18Q6NYC8 613 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZSCAN29Q8IWY8 852 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 TRIM34Q9BYJ4 488 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 PDCL3Q9H2J4 239 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 CUEDC2Q9H467 287 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 MAGEF1Q9HAY2 307 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 RIC8AQ9NPQ8 531 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 KIF13BQ9NQT8 1826 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 RAD21O60216 631 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 TXKP42681 527 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 KRT31Q15323 416 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 CALCRLQ16602 461 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 UBE2SQ16763 222 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 SH3BP5LQ7L8J4 393 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 PPFIBP1Q86W92 1011 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 FCHSD1Q86WN1 690 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 IGSF22Q8N9C0 903 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 IDI2Q9BXS1 227 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 PI4KBQ9UBF8 816 aa12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 LIMA1Q9UHB6 759 aaKnown RBP12.41□□□□□ -0.42
HLA-DMB-260ENST00000477537 AKR1B15C9JRZ8 316 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZBTB5O15062 677 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 STX10O60499 249 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 EEF2P13639 858 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 CCT6AP40227 531 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 PBX1P40424 430 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 TNNI2P48788 182 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 SPAG1Q07617 926 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 SHROOM1Q2M3G4 852 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 SYT10Q6XYQ8 523 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 MTERF4Q7Z6M4 381 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 ADSSL1Q8N142 457 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 MTMR9Q96QG7 549 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 SPON1Q9HCB6 807 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
HLA-DMB-260ENST00000477537 KCNJ18B7U540 433 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 ZSCAN12O43309 604 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 SLC37A4O43826 429 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 EDIL3O43854 480 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 TDP2O95551 362 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 DPEP1P16444 411 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 RBL2Q08999 1139 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 KCNJ12Q14500 433 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 TCP11X2Q5H9J9 407 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 CREBRFQ8IUR6 639 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 REXO1L1PQ8IX06 675 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 ANKRD20A12PQ8NF67 263 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 CUL5Q93034 780 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 MTMR8Q96EF0 704 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 MMTAG2Q9BU76 263 aaKnown RBP12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 TAB2Q9NYJ8 693 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 PPP2R2CQ9Y2T4 447 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 TRIM49BA6NDI0 452 aa12.39□□□□□ -0.43
HLA-DMB-260ENST00000477537 H7C1D1 291 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms