RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 TBC1D5Q92609 795 aa10.7□□□□□ -0.7
PGK1-204ENST00000477335 CHMP5Q9NZZ3 219 aa10.7□□□□□ -0.7
PGK1-204ENST00000477335 RBM27Q9P2N5 1060 aaKnown RBP10.7□□□□□ -0.7
PGK1-204ENST00000477335 RBPJLQ9UBG7 517 aa10.7□□□□□ -0.7
PGK1-204ENST00000477335 CIZ1Q9ULV3 898 aaPredicted RBP10.7□□□□□ -0.7
PGK1-204ENST00000477335 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
PGK1-204ENST00000477335 BTBD18B2RXH4 712 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 NAPAP54920 295 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 IRX3P78415 501 aaPredicted RBP10.69□□□□□ -0.7
PGK1-204ENST00000477335 UBE2SQ16763 222 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 DEFB115Q30KQ5 88 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 Q3C1V9 767 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 PAXIP1Q6ZW49 1069 aaPredicted RBP10.69□□□□□ -0.7
PGK1-204ENST00000477335 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 DIS3L2Q8IYB7 885 aaKnown RBP10.69□□□□□ -0.7
PGK1-204ENST00000477335 DAGLBQ8NCG7 672 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 CCDC102AQ96A19 550 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 CAPNS2Q96L46 248 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 AMNQ9BXJ7 453 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 SH3GLB2Q9NR46 395 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 TMEM260Q9NX78 707 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 HOXC10Q9NYD6 342 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 CCPG1Q9ULG6 757 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 PCDHA1Q9Y5I3 950 aa10.69□□□□□ -0.7
PGK1-204ENST00000477335 ESYT2A0FGR8 921 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 SMCO2A6NFE2 343 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 C19orf67A6NJJ6 358 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 H3BQV1 296 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 HAX1O00165 279 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 NFIBO00712 420 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 WNT7AO00755 349 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 ATP2A1O14983 1001 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 EDIL3O43854 480 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 ZBED4O75132 1171 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 F13A1P00488 732 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 PDCP20941 246 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 OSBPP22059 807 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 CLK2P49760 499 aaKnown RBP10.68□□□□□ -0.7
PGK1-204ENST00000477335 VEGFBP49765 207 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 NLRP5P59047 1200 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 IFFO2Q5TF58 517 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 PPP1R18Q6NYC8 613 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 PAGR1Q9BTK6 254 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 PCDHA6Q9UN73 950 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 PCDHA4Q9UN74 947 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 KIF3AQ9Y496 699 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 PCDHA8Q9Y5H6 950 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 THSD7BQ9C0I4 1608 aa10.68□□□□□ -0.7
PGK1-204ENST00000477335 WDR33Q9C0J8 1336 aaKnown RBP10.67□□□□□ -0.7
PGK1-204ENST00000477335 hCG_1984214I3L0E3 225 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 MEIS2O14770 477 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 ALAS1P13196 640 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 U2AF2P26368 475 aaKnown RBP eCLIP10.67□□□□□ -0.7
PGK1-204ENST00000477335 KRT2P35908 639 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 TM4SF4P48230 202 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 OAZ1P54368 228 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 NUCB2P80303 420 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 PABPC4Q13310 644 aaKnown RBP eCLIP10.67□□□□□ -0.7
PGK1-204ENST00000477335 TRIM29Q14134 588 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 FOXD4L6Q3SYB3 417 aaPredicted RBP10.67□□□□□ -0.7
PGK1-204ENST00000477335 MCTP1Q6DN14 999 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 SNRNP48Q6IEG0 339 aaKnown RBP10.67□□□□□ -0.7
PGK1-204ENST00000477335 USP17L6PQ6QN14 398 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 FOXD4L3Q6VB84 417 aaPredicted RBP10.67□□□□□ -0.7
PGK1-204ENST00000477335 BLIDQ8IZY5 108 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 ZNF713Q8N859 430 aaPredicted RBP10.67□□□□□ -0.7
PGK1-204ENST00000477335 RGS22Q8NE09 1264 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 SPOCK2Q92563 424 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 TNPO1Q92973 898 aaKnown RBP10.67□□□□□ -0.7
PGK1-204ENST00000477335 PGBD1Q96JS3 809 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 MOV10L1Q9BXT6 1211 aaKnown RBP10.67□□□□□ -0.7
PGK1-204ENST00000477335 RIC8AQ9NPQ8 531 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 HOMER2Q9NSB8 354 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 COL20A1Q9P218 1284 aa10.67□□□□□ -0.7
PGK1-204ENST00000477335 ABCB11O95342 1321 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 FDX1P10109 184 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 CD44P16070 742 aaKnown RBP10.66□□□□□ -0.7
PGK1-204ENST00000477335 HOXA13P31271 388 aaPredicted RBP10.66□□□□□ -0.7
PGK1-204ENST00000477335 STAT3P40763 770 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 TOB1P50616 345 aaPredicted RBP10.66□□□□□ -0.7
PGK1-204ENST00000477335 ADCY7P51828 1080 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 NOGQ13253 232 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 NBR1Q14596 966 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 PLS1Q14651 629 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 JAKMIP3Q5VZ66 844 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 SLC30A10Q6XR72 485 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 RIOX2Q8IUF8 465 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 MB21D1Q8N884 522 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 CCDC148Q8NFR7 591 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 TRERF1Q96PN7 1200 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 PURBQ96QR8 312 aaKnown RBP10.66□□□□□ -0.7
PGK1-204ENST00000477335 TEX13BQ9BXU2 312 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 FTOQ9C0B1 505 aaKnown RBP eCLIP10.66□□□□□ -0.7
PGK1-204ENST00000477335 SPATC1LQ9H0A9 340 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 PORCNQ9H237 461 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 PSTPIP2Q9H939 334 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 RNF146Q9NTX7 359 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 MORF4L1Q9UBU8 362 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 BIN2Q9UBW5 565 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms