RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 ALS2Q96Q42 1657 aa5.98□□□□□ -1.45
NSMCE4A-208ENST00000477289 RTL1A6NKG5 1358 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 AATKQ6ZMQ8 1374 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 FAM83GA6ND36 823 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 GFRA2O00451 464 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 RRS1Q15050 365 aaKnown RBP5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 ARHGEF25Q86VW2 580 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 IP6K1Q92551 441 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 LTV1Q96GA3 475 aaPredicted RBP5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 ATP13A1Q9HD20 1204 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 PCDHB5Q9Y5E4 795 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 CAPN6Q9Y6Q1 641 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 OVOS2A0A0J9YW53 1432 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 OVOS2Q6IE36 1432 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 KIF20BQ96Q89 1820 aa5.97□□□□□ -1.45
NSMCE4A-208ENST00000477289 FLT4P35916 1363 aa5.96□□□□□ -1.45
NSMCE4A-208ENST00000477289 NFIBO00712 420 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 INHBBP09529 407 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 EIF4BP23588 611 aaKnown RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 ETF1P62495 437 aaKnown RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 RPS26P62854 115 aaKnown RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 RBM6P78332 1123 aaKnown RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 FGD1P98174 961 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 SEPT6Q14141 434 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 SFRP5Q5T4F7 317 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 HID1Q8IV36 788 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 MFSD4AQ8N468 514 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 MFSD2AQ8NA29 543 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 PNNQ9H307 717 aaKnown RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 CARS2Q9HA77 564 aaKnown RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 C19orf73Q9NVV2 129 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 USP35Q9P2H5 1018 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 TPX2Q9ULW0 747 aaKnown RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 THRAP3Q9Y2W1 955 aaKnown RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 ST14Q9Y5Y6 855 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 BLMP54132 1417 aaPredicted RBP5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 NRKQ7Z2Y5 1582 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 MAP3K19Q56UN5 1328 aa5.96□□□□□ -1.46
NSMCE4A-208ENST00000477289 COL14A1Q05707 1796 aaKnown RBP5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 SLIT3O75094 1523 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 PIK3C2AO00443 1686 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 FAM155AB1AL88 458 aaPredicted RBP5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 DIAPH1O60610 1272 aaKnown RBP5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 PRPF40AO75400 957 aaKnown RBP5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 CST3P01034 146 aaPredicted RBP5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 HOXC9P31274 260 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 GRK4P32298 578 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 MTHFSP49914 203 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 CCDC85BQ15834 202 aaPredicted RBP5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 VPS72Q15906 364 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 CDKAL1Q5VV42 579 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 PRAMEF13Q5VWM6 474 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 LETMD1Q6P1Q0 360 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 TCP11L2Q8N4U5 519 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 RAPGEF4Q8WZA2 1011 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 KIRREL1Q96J84 757 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 AK5Q9Y6K8 562 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 PHRF1Q9P1Y6 1649 aaKnown RBP5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 WDR17Q8IZU2 1322 aa5.95□□□□□ -1.46
NSMCE4A-208ENST00000477289 NPIPB6E9PJ23 425 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 H3BS24 57 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 EXOC5O00471 708 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 U2SURPO15042 1029 aaKnown RBP5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 CTSWP56202 376 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 WDR43Q15061 677 aaKnown RBP eCLIP5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 TMEM67Q5HYA8 995 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 AGMOQ6ZNB7 445 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 FBXO15Q8NCQ5 510 aaPredicted RBP5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 XAGE3Q8WTP9 111 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 DUSP9Q99956 384 aaKnown RBP5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 TRAIPQ9BWF2 469 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 POLKQ9UBT6 870 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 LRP6O75581 1613 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 MYBBP1AQ9BQG0 1328 aaKnown RBP5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 ABCC6O95255 1503 aa5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 MARF1Q9Y4F3 1742 aaKnown RBP5.94□□□□□ -1.46
NSMCE4A-208ENST00000477289 INSRP06213 1382 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 CRB1P82279 1406 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 IL2RBP14784 551 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 PPP2R1AP30153 589 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 HSP90AB2PQ58FF8 381 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 DIEXFQ68CQ4 756 aaKnown RBP5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 NPAS4Q8IUM7 802 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 DIRC2Q96SL1 478 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 TJP2Q9UDY2 1190 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 JAG2Q9Y219 1238 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 TACC3Q9Y6A5 838 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 USP54Q70EL1 1684 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 ANKRD26Q9UPS8 1709 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 SLIT2O94813 1529 aa5.93□□□□□ -1.46
NSMCE4A-208ENST00000477289 ABCA3Q99758 1704 aa5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 NWD2Q9ULI1 1742 aa5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 CBX7O95931 251 aa5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 TFE3P19532 575 aaPredicted RBP5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 FBLN1P23142 703 aa5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 LIG3P49916 1009 aa5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 DDB1Q16531 1140 aa5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 MAP3K11Q16584 847 aa5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 MEI1Q5TIA1 1274 aa5.92□□□□□ -1.46
NSMCE4A-208ENST00000477289 THAP5Q7Z6K1 395 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms