RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 PANK3Q9H999 370 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 C19orf73Q9NVV2 129 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 UBP1Q9NZI7 540 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 ADAMTS1Q9UHI8 967 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 ADAMTSL3P82987 1691 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 DISP3Q9P2K9 1392 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 ADAMTS13Q76LX8 1427 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 DNAJC25-GNG10A0A024R161 153 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 RGS13O14921 159 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 ATE1O95260 518 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 HK2P52789 917 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 RALGPS1Q5JS13 557 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 GK5Q6ZS86 529 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 NKD1Q969G9 470 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 ALKQ9UM73 1620 aa7.8□□□□□ -1.16
CDKN1B-204ENST00000477087 IQGAP1P46940 1657 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 MYO3AQ8NEV4 1616 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 ZNF503-AS2A6NEH8 195 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 ZNF76P36508 570 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 CRKP46108 304 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 ZNF165P49910 485 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 GAB4Q2WGN9 574 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 OVOS1Q6IE37 1185 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 KIAA0825Q8IV33 1275 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 ABHD4Q8TB40 342 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 SPON2Q9BUD6 331 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 INSRP06213 1382 aa7.79□□□□□ -1.16
CDKN1B-204ENST00000477087 LIN37Q96GY3 246 aaPredicted RBP7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 FAM84AQ96KN4 292 aa7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 PRAM1Q96QH2 718 aa7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 NT5C1AQ9BXI3 368 aa7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 ADAMTS10Q9H324 1103 aa7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 EHMT1Q9H9B1 1298 aa7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 POGKQ9P215 609 aa7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 KNSTRNQ9Y448 316 aa7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 METP08581 1390 aa7.78□□□□□ -1.16
CDKN1B-204ENST00000477087 PTPRMP28827 1452 aa7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 PARD3Q8TEW0 1356 aa7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 RBM47A0AV96 593 aaKnown RBP7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 BTBD11A6QL63 1104 aa7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 CLCQ05315 142 aa7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 RAD51AP2Q09MP3 1159 aa7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 REXO1Q8N1G1 1221 aaKnown RBP7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 MYLIPQ8WY64 445 aa7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 DHX38Q92620 1227 aaKnown RBP7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 PCDHA11Q9Y5I1 949 aa7.77□□□□□ -1.17
CDKN1B-204ENST00000477087 C3P01024 1663 aa7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 CFAP65Q6ZU64 1925 aaKnown RBP7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 BRD4O60885 1362 aaPredicted RBP7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 POLR1AO95602 1720 aaPredicted RBP7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 UBOX5O94941 541 aa7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 CENPBP07199 599 aaPredicted RBP7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 LRRFIP1Q32MZ4 808 aaKnown RBP7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 CDCP2Q5VXM1 449 aa7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 NLRC3Q7RTR2 1065 aa7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 USP48Q86UV5 1035 aa7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 BACH2Q9BYV9 841 aa7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 METTL5Q9NRN9 209 aaKnown RBP7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 ASXL1Q8IXJ9 1541 aa7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 MYBBP1AQ9BQG0 1328 aaKnown RBP7.76□□□□□ -1.17
CDKN1B-204ENST00000477087 UBR1Q8IWV7 1749 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 SHISA3A0PJX4 238 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 HPXP02790 462 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 NMIQ13287 307 aaPredicted RBP7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 SLITRK4Q8IW52 837 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 OXR1Q8N573 874 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 PDZD8Q8NEN9 1154 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 ENOX1Q8TC92 643 aaKnown RBP7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 PNISRQ8TF01 805 aaKnown RBP7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 VWCEQ96DN2 955 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 ATG4CQ96DT6 458 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 CDK19Q9BWU1 502 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 CNNM2Q9H8M5 875 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 TERF2IPQ9NYB0 399 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 STK26Q9P289 416 aa7.75□□□□□ -1.17
CDKN1B-204ENST00000477087 NSD2O96028 1365 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 ANKRD36BQ8N2N9 1353 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 CLEC3AO75596 197 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 KCNA6P17658 529 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 POLR2BP30876 1174 aaKnown RBP7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 CCNFP41002 786 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 ERVFC1P60507 584 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 DUSP4Q13115 394 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 ZNF124Q15973 351 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 PRR23BQ6ZRT6 265 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 RNF34Q969K3 372 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 EAF1Q96JC9 268 aaPredicted RBP7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 SLC12A5Q9H2X9 1139 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 PTCH1Q13635 1447 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 DIP2AQ14689 1571 aa7.74□□□□□ -1.17
CDKN1B-204ENST00000477087 CEP170BQ9Y4F5 1589 aaPredicted RBP7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 SSU72P8A0A1W2PR75 194 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 ZGLP1P0C6A0 271 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 FANCCQ00597 558 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 MESP2Q0VG99 397 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 FZD5Q13467 585 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 LDLRAD1Q5T700 205 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms