RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 POTEDQ86YR6 584 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 RIC8AQ9NPQ8 531 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 LRRC10BA6NIK2 292 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 TEX33O43247 280 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 SLC15A2Q16348 729 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
NUP188-205ENST00000477069 CABP7Q86V35 215 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 LIMA1Q9UHB6 759 aaKnown RBP12.97□□□□□ -0.33
NUP188-205ENST00000477069 GDAQ9Y2T3 454 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 NRDCO43847 1150 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 RHOBTB3O94955 611 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 PLCG1P19174 1290 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 PRCPP42785 496 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 RBM10P98175 930 aaKnown RBP12.97□□□□□ -0.33
NUP188-205ENST00000477069 PAK1Q13153 545 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 SIAH1Q8IUQ4 282 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 ADSSL1Q8N142 457 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
NUP188-205ENST00000477069 KIF2AO00139 706 aaPredicted RBP12.96□□□□□ -0.33
NUP188-205ENST00000477069 AOC3Q16853 763 aa12.96□□□□□ -0.33
NUP188-205ENST00000477069 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
NUP188-205ENST00000477069 CAMKK2Q96RR4 588 aa12.96□□□□□ -0.33
NUP188-205ENST00000477069 CTAGE1Q96RT6 745 aa12.96□□□□□ -0.33
NUP188-205ENST00000477069 NYAP2Q9P242 653 aa12.96□□□□□ -0.33
NUP188-205ENST00000477069 PI4KBQ9UBF8 816 aa12.96□□□□□ -0.33
NUP188-205ENST00000477069 SLC37A4O43826 429 aa12.96□□□□□ -0.33
NUP188-205ENST00000477069 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.331e-7■■■■□ 23.1
NUP188-205ENST00000477069 NELFBQ8WX92 580 aa12.96□□□□□ -0.33
NUP188-205ENST00000477069 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.34
NUP188-205ENST00000477069 FAM196BA6NMK8 535 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 YDJCA8MPS7 323 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 USP17L10C9JJH3 530 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
NUP188-205ENST00000477069 ZBTB5O15062 677 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 ARHGAP6O43182 974 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 TCP10Q12799 353 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 GIMAP8Q8ND71 665 aaPredicted RBP12.95□□□□□ -0.34
NUP188-205ENST00000477069 COL4A5P29400 1685 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 STX10O60499 249 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 COBLO75128 1261 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 EEF2P13639 858 aaKnown RBP12.95□□□□□ -0.34
NUP188-205ENST00000477069 TECP42680 631 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 KCTD1Q719H9 257 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 REXO1L1PQ8IX06 675 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 DCAF4Q8WV16 495 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 C7orf25Q9BPX7 421 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 TDP2O95551 362 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 SLC16A2P36021 539 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 KRT31Q15323 416 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 SYCP1Q15431 976 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 EZH2Q15910 746 aaKnown RBP12.95□□□□□ -0.34
NUP188-205ENST00000477069 ANKRD7Q92527 254 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 PLIN2Q99541 437 aa12.95□□□□□ -0.34
NUP188-205ENST00000477069 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
NUP188-205ENST00000477069 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
NUP188-205ENST00000477069 CCP110O43303 1012 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 TUBB4AP04350 444 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 ADKP55263 362 aaKnown RBP12.94□□□□□ -0.34
NUP188-205ENST00000477069 CERKLQ49MI3 558 aaPredicted RBP12.94□□□□□ -0.34
NUP188-205ENST00000477069 TCP11X2Q5H9J9 407 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 CC2D2BQ6DHV5 1058 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 PPP4R3AQ6IN85 833 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 IRF2BP1Q8IU81 584 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 TRIM9Q9C026 710 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 KANSL2Q9H9L4 492 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 PMS1P54277 932 aaKnown RBP12.94□□□□□ -0.34
NUP188-205ENST00000477069 GRB10Q13322 594 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 CALCRLQ16602 461 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 UBE2SQ16763 222 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 CCDC96Q2M329 555 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 CUL5Q93034 780 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 PNMA5Q96PV4 448 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
NUP188-205ENST00000477069 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
NUP188-205ENST00000477069 ENTPD3O75355 529 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 FECHP22830 423 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 SPAG1Q07617 926 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 TRIM65Q6PJ69 517 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 RASSF8Q8NHQ8 419 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 RBM5P52756 815 aaKnown RBP eCLIP12.93□□□□□ -0.34
NUP188-205ENST00000477069 COBLL1Q53SF7 1204 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 TMEM179Q6ZVK1 233 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 GMCL1P1Q8NEA9 526 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 KIF18AQ8NI77 898 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 PDCL3Q9H2J4 239 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 BLOC1S4Q9NUP1 217 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 RGS17Q9UGC6 210 aaPredicted RBP12.93□□□□□ -0.34
NUP188-205ENST00000477069 MAPK8IP1Q9UQF2 711 aa12.93□□□□□ -0.34
NUP188-205ENST00000477069 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
NUP188-205ENST00000477069 KCNJ18B7U540 433 aa12.92□□□□□ -0.34
NUP188-205ENST00000477069 AKR1B15C9JRZ8 316 aaPredicted RBP12.92□□□□□ -0.34
NUP188-205ENST00000477069 H7C1D1 291 aa12.92□□□□□ -0.34
NUP188-205ENST00000477069 TXKP42681 527 aa12.92□□□□□ -0.34
NUP188-205ENST00000477069 COPB1P53618 953 aaKnown RBP12.92□□□□□ -0.34
NUP188-205ENST00000477069 JAG1P78504 1218 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms